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B hypothetical protein B [ Bacteriophage APSE-2 ]

Gene ID: 7020948, updated on 7-Jan-2023

Summary

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Gene symbol
B
Gene description
hypothetical protein B
Locus tag
APSE207
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacteriophage APSE-2 (isolate: T5A, nat-host: Candidatus Hamiltonella defensa)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Sendosyvirus; Sendosyvirus APSE2
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Genomic context

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Sequence:
NC_011551.1 (5689..6078)

NC_011551.1Genomic Context describing neighboring genes Neighboring gene anti-termination protein Q-like Neighboring gene hypothetical protein A Neighboring gene cytolethal distending toxin B subunit Neighboring gene hypothetical protein D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_011551.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Diverse phage-encoded toxins in a protective insect endosymbiont. Degnan PH, et al. Appl Environ Microbiol, 2008 Nov. PMID 18791000, Free PMC Article
  2. The players in a mutualistic symbiosis: insects, bacteria, viruses, and virulence genes. Moran NA, et al. Proc Natl Acad Sci U S A, 2005 Nov 22. PMID 16195380, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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regulatory

  • Loc: 5689-5693 regulatory_class = ribosome_binding_site

variation

  • Loc: 5782
  • Loc: 5786 replace = a
  • Loc: 5816
  • Loc: 5828-5829 replace = gg
  • Loc: 5881-5882 replace = gc
  • Loc: 5883 replace = a
  • Loc: 5886-5886
  • Loc: 5887-5889 replace = tgg
  • Loc: 5892-5893 replace = tc
  • Loc: 5895
  • Loc: 5900
  • Loc: 5902 replace = a
  • Loc: 5905-5906 replace = gg
  • Loc: 5951
  • Loc: 6018-6019 replace = ag
  • Loc: 6024 replace = g
  • Loc: 6026-6031 replace =
  • Loc: 6035 replace = a
  • Loc: 6037 replace = a
  • Loc: 6047 replace = t
  • Loc: 6064 replace = c
  • Loc: 6075 replace = c

General protein information

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Preferred Names
hypothetical protein B

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_011551.1 Reference assembly

    Range
    5689..6078
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_002308520.1 hypothetical protein B [Bacteriophage APSE-2]

    See identical proteins and their annotated locations for YP_002308520.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B6SCU6
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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