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PPARGC1B PPARG coactivator 1 beta [ Macaca mulatta (Rhesus monkey) ]

Gene ID: 711027, updated on 17-Aug-2024

Summary

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Official Symbol
PPARGC1Bprovided by VGNC
Official Full Name
PPARG coactivator 1 betaprovided by VGNC
Primary source
VGNC:VGNC:76134
See related
Ensembl:ENSMMUG00000004749
Gene type
protein coding
RefSeq status
MODEL
Organism
Macaca mulatta
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs
human mouse all
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Genomic context

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See PPARGC1B in Genome Data Viewer
Location:
chromosome: 6
Exon count:
12
Annotation release Status Assembly Chr Location
103 current Mmul_10 (GCF_003339765.1) 6 NC_041759.1 (147238701..147363201)
102 previous assembly Mmul_8.0.1 (GCF_000772875.2) 6 NC_027898.1 (147856034..147983295)

Chromosome 6 - NC_041759.1Genomic Context describing neighboring genes Neighboring gene Rho guanine nucleotide exchange factor 37 Neighboring gene U6 spliceosomal RNA Neighboring gene small nucleolar RNA U3 Neighboring gene microRNA mir-378a Neighboring gene phosphodiesterase 6A Neighboring gene solute carrier family 26 member 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A new rhesus macaque assembly and annotation for next-generation sequencing analyses. Zimin AV, et al. Biol Direct, 2014 Oct 14. PMID 25319552, Free PMC Article
  2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor coactivator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription factor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome proliferator-activated receptor gamma coactivator 1-beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

  1. NC_041759.1 Reference Mmul_10 Primary Assembly

    Range
    147238701..147363201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015141222.2 → XP_014996708.2  peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X1

    UniProtKB/TrEMBL
    F6SU14, G7MVL4
    Related
    ENSMMUP00000006315.4, ENSMMUT00000006712.4
    Conserved Domains (1) summary
    cd12356
    Location:900 → 979
    RRM_PPARGC1B; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator 1-beta (PGC-1-beta) and similar proteins

  2. XM_015141223.2 → XP_014996709.2  peroxisome proliferator-activated receptor gamma coactivator 1-beta isoform X2

    UniProtKB/TrEMBL
    A0A5F8A4C3, F6SU08
    Related
    ENSMMUP00000006316.4, ENSMMUT00000006713.4
    Conserved Domains (1) summary
    cd12356
    Location:861 → 940
    RRM_PPARGC1B; RNA recognition motif in peroxisome proliferator-activated receptor gamma coactivator 1-beta (PGC-1-beta) and similar proteins

RNA

  1. XR_003730590.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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