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GOLGA8CP golgin A8 family member C, pseudogene [ Homo sapiens (human) ]

Gene ID: 729786, updated on 2-Nov-2024

Summary

Official Symbol
GOLGA8CPprovided by HGNC
Official Full Name
golgin A8 family member C, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:32375
See related
Ensembl:ENSG00000181984 AllianceGenome:HGNC:32375
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
GOLGA8C
Summary
Predicted to be involved in Golgi organization. Predicted to be located in Golgi apparatus. Predicted to be active in Golgi cis cisterna; Golgi cisterna membrane; and cis-Golgi network. [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward testis (RPKM 29.2) See more
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Genomic context

See GOLGA8CP in Genome Data Viewer
Location:
15q11.2
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 15 NC_000015.10 (20562349..20575703)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 15 NC_060939.1 (18474187..18487541)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 15 NC_000015.9 (20767674..20781026)

Chromosome 15 - NC_000015.10Genomic Context describing neighboring genes Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:20738609-20739110 Neighboring gene golgin A6 family like 6 (gene/pseudogene) Neighboring gene MPHOSPH10 pseudogene 4 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr15:20775869-20776369 Neighboring gene RNA, 7SL, cytoplasmic 759, pseudogene Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr15:20787397-20787984 Neighboring gene SPATA31 subfamily E member 2, pseudogene Neighboring gene ring finger protein 145 pseudogene

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Other Names

  • golgi autoantigen, golgin subfamily a, 8C

Gene Ontology Provided by GOA

Process Evidence Code Pubs
involved_in Golgi organization IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
is_active_in Golgi cis cisterna IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in Golgi cisterna membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
is_active_in cis-Golgi network IBA
Inferred from Biological aspect of Ancestor
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_027411.2 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC023310
    Related
    ENST00000446144.2

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000015.10 Reference GRCh38.p14 Primary Assembly

    Range
    20562349..20575703
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_021160017.1 Reference GRCh38.p14 PATCHES

    Range
    804039..817393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060939.1 Alternate T2T-CHM13v2.0

    Range
    18474187..18487541
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)