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Spin2-ps1 spindlin family, member 2, pseudogene 1 [ Mus musculus (house mouse) ]

Gene ID: 74851, updated on 8-Feb-2024

Summary

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Official Symbol
Spin2-ps1provided by MGI
Official Full Name
spindlin family, member 2, pseudogene 1provided by MGI
Primary source
MGI:MGI:3650966
See related
AllianceGenome:MGI:3650966
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gm14354
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Genomic context

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See Spin2-ps1 in Genome Data Viewer
Location:
X A1.1; X 1.69 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (3740904..3741681, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (3835879..3836656, complement)

Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene BTB domain containing 35, family member 10 Neighboring gene predicted gene 14357 Neighboring gene STARR-seq mESC enhancer starr_46616 Neighboring gene STARR-seq mESC enhancer starr_46617 Neighboring gene STARR-seq mESC enhancer starr_46618 Neighboring gene STARR-seq mESC enhancer starr_46619 Neighboring gene STARR-seq mESC enhancer starr_46620 Neighboring gene BTB domain containing 35, family member 16 Neighboring gene predicted gene, 46693 Neighboring gene predicted gene, 17854

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables methylated histone binding ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
located_in cytosol ISO
Inferred from Sequence Orthology
more info
  
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
  

General protein information

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Preferred Names
spindlin 2 family member

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029106.2 → NP_083382.2  spindlin 2 family member

    Status: VALIDATED

    Source sequence(s)
    CT027595
    UniProtKB/TrEMBL
    Q149L1
    Conserved Domains (1) summary
    pfam02513
    Location:30 → 77
    Spin-Ssty; Spin/Ssty Family

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000086.8 Reference GRCm39 C57BL/6J

    Range
    3740904..3741681 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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