si:ch211-117n7.7 si:ch211-117n7.7 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: si:ch211-117n7.7provided by ZNC
Official Full Name: si:ch211-117n7.7provided by ZNC
Primary source: ZFIN:ZDB-GENE-060503-569
See related: Ensembl:ENSDARG00000069828 AllianceGenome:ZFIN:ZDB-GENE-060503-569
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:153037
Summary: Predicted to enable lysophospholipase activity and monoacylglycerol lipase activity. Predicted to be involved in monoacylglycerol catabolic process and phosphatidylserine catabolic process. Predicted to be located in membrane. Predicted to be active in endoplasmic reticulum membrane. Orthologous to human ABHD12B (abhydrolase domain containing 12B). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: all
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Genomic context

See si:ch211-117n7.7 in Genome Data Viewer

Location:: chromosome: 13

Exon count:: 13

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	13	NC_007124.7 (9878544..9886566, complement)
105	previous assembly	GRCz10 (GCF_000002035.5)	13	NC_007124.6 (9546521..9554543, complement)

Chromosome 13 - NC_007124.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables lysophospholipase activity	IBA Inferred from Biological aspect of Ancestor more info
enables monoacylglycerol lipase activity	IBA Inferred from Biological aspect of Ancestor more info

Process	Evidence Code	Pubs
involved_in monoacylglycerol catabolic process	IBA Inferred from Biological aspect of Ancestor more info
involved_in phosphatidylserine catabolic process	IBA Inferred from Biological aspect of Ancestor more info

Component	Evidence Code	Pubs
is_active_in endoplasmic reticulum membrane	IBA Inferred from Biological aspect of Ancestor more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: Monoacylglycerol lipase ABHD12-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001045343.1 → NP_001038808.1 Monoacylglycerol lipase ABHD12-like

See identical proteins and their annotated locations for NP_001038808.1

Status: PROVISIONAL

Source sequence(s)

BC122123

UniProtKB/TrEMBL

Q0P4E4

Related

ENSDARP00000092701.4, ENSDART00000101926.6

Conserved Domains (2) summary

COG2267
Location:91 → 347

PldB; Lysophospholipase, alpha-beta hydrolase superfamily [Lipid transport and metabolism]

pfam12695
Location:124 → 304

Abhydrolase_5; Alpha/beta hydrolase family