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1700063K16Rik RIKEN cDNA 1700063K16 gene [ Mus musculus (house mouse) ]

Gene ID: 76610, updated on 17-Aug-2024

Summary

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Official Symbol
1700063K16Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700063K16 geneprovided by MGI
Primary source
MGI:MGI:1923860
See related
Ensembl:ENSMUSG00000100857 AllianceGenome:MGI:1923860
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
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Genomic context

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See 1700063K16Rik in Genome Data Viewer
Location:
16 C3.1; 16 44.37 cM
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 16 NC_000082.7 (76616471..76686183, complement)

Chromosome 16 - NC_000082.7Genomic Context describing neighboring genes Neighboring gene CapStarr-seq enhancer MGSCv37_chr16:76549861-76550057 Neighboring gene predicted gene, 30726 Neighboring gene STARR-seq mESC enhancer starr_41284 Neighboring gene STARR-seq mESC enhancer starr_41285 Neighboring gene STARR-positive B cell enhancer mm9_chr16:76680520-76680820 Neighboring gene STARR-seq mESC enhancer starr_41286 Neighboring gene STARR-seq mESC enhancer starr_41287 Neighboring gene predicted gene, 30790 Neighboring gene STARR-seq mESC enhancer starr_41288 Neighboring gene STARR-seq mESC enhancer starr_41289 Neighboring gene STARR-seq mESC enhancer starr_41290 Neighboring gene V-type proton ATPase subunit F pseudogene Neighboring gene STARR-positive B cell enhancer ABC_E10917 Neighboring gene STARR-seq mESC enhancer starr_41291 Neighboring gene ribosomal protein L19 pseudogene Neighboring gene RIKEN cDNA 1700041M19 gene Neighboring gene STARR-seq mESC enhancer starr_41292

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000082.7 Chromosome 16 Reference GRCm39 C57BL/6J

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  2. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  3. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article
  4. Normalization and subtraction of cap-trapper-selected cDNAs to prepare full-length cDNA libraries for rapid discovery of new genes. Carninci P, et al. Genome Res, 2000 Oct. PMID 11042159, Free PMC Article
  5. Functional annotation of a full-length mouse cDNA collection. Kawai J, et al. Nature, 2001 Feb 8. PMID 11217851

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_170997.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC158235
    Related
    ENSMUST00000208105.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000082.7 Reference GRCm39 C57BL/6J

    Range
    76616471..76686183 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_029672.1: Suppressed sequence

    Description
    NM_029672.1: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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