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ccdc137 coiled-coil domain containing 137 [ Danio rerio (zebrafish) ]

Gene ID: 767789, updated on 2-Nov-2024

Summary

Official Symbol
ccdc137provided by ZNC
Official Full Name
coiled-coil domain containing 137provided by ZNC
Primary source
ZFIN:ZDB-GENE-060929-1206
See related
Ensembl:ENSDARG00000104024 AllianceGenome:ZFIN:ZDB-GENE-060929-1206
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
fb79h11; id:ibd1138; im:7139055; wu:fb79h11; zgc:153477
Summary
Predicted to be active in nucleus. Is expressed in immature eye; optic tectum; and paraxial mesoderm. Orthologous to human CCDC137 (coiled-coil domain containing 137). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See ccdc137 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (12893153..12903609, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (12741704..12752160, complement)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene potassium inwardly rectifying channel subfamily J member 2b Neighboring gene BTB (POZ) domain containing 17b Neighboring gene platelet-derived growth factor alpha polypeptide b Neighboring gene protein kinase, cAMP-dependent, regulatory, type I, beta

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General gene information

Markers

Clone Names

  • MGC153477

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
coiled-coil domain-containing protein 137

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076756.1NP_001070224.1  coiled-coil domain-containing protein 137

    See identical proteins and their annotated locations for NP_001070224.1

    Status: PROVISIONAL

    Source sequence(s)
    BC124364
    UniProtKB/TrEMBL
    Q08C68
    Related
    ENSDARP00000135401.1, ENSDART00000160522.2

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    12893153..12903609 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCz11 ALT_DRER_TU_1

Genomic

  1. NW_018394521.1 Reference GRCz11 ALT_DRER_TU_1

    Range
    70703..81159 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)