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2510039O18Rik RIKEN cDNA 2510039O18 gene [ Mus musculus (house mouse) ]

Gene ID: 77034, updated on 9-Dec-2024

Summary

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Official Symbol
2510039O18Rikprovided by MGI
Official Full Name
RIKEN cDNA 2510039O18 geneprovided by MGI
Primary source
MGI:MGI:1924284
See related
Ensembl:ENSMUSG00000044496 AllianceGenome:MGI:1924284
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Kiaa2013
Summary
Predicted to be located in membrane. Orthologous to human KIAA2013 (KIAA2013). [provided by Alliance of Genome Resources, Dec 2024]
Expression
Ubiquitous expression in colon adult (RPKM 84.0), duodenum adult (RPKM 64.8) and 28 other tissues See more
Orthologs
human all
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Genomic context

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See 2510039O18Rik in Genome Data Viewer
Location:
4 E1; 4 78.57 cM
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 4 NC_000070.7 (148023849..148031773)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 4 NC_000070.6 (147939519..147947316)

Chromosome 4 - NC_000070.7Genomic Context describing neighboring genes Neighboring gene mitofusin 2 Neighboring gene STARR-positive B cell enhancer ABC_E9625 Neighboring gene procollagen-lysine, 2-oxoglutarate 5-dioxygenase 1 Neighboring gene STARR-seq mESC enhancer starr_12062 Neighboring gene STARR-positive B cell enhancer ABC_E2145 Neighboring gene natriuretic peptide type B Neighboring gene natriuretic peptide type A

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Prediction of the coding sequences of mouse homologues of KIAA gene: IV. The complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, et al. DNA Res, 2004 Jun 30. PMID 15368895
  2. Libraries enriched for alternatively spliced exons reveal splicing patterns in melanocytes and melanomas. Watahiki A, et al. Nat Methods, 2004 Dec. PMID 15782199
  3. Genome-wide expression profiling of mid-gestation placenta and embryo using a 15,000 mouse developmental cDNA microarray. Tanaka TS, et al. Proc Natl Acad Sci U S A, 2000 Aug 1. PMID 10922068, Free PMC Article
  4. Normalization and subtraction: two approaches to facilitate gene discovery. Bonaldo MF, et al. Genome Res, 1996 Sep. PMID 8889548
  5. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

Variation

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Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

General gene information

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Markers

Homology

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein KIAA2013

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029841.3 → NP_084117.2  uncharacterized protein KIAA2013 precursor

    See identical proteins and their annotated locations for NP_084117.2

    Status: VALIDATED

    Source sequence(s)
    AK011059, AK153761, CX230455
    Consensus CDS
    CCDS18925.1
    UniProtKB/Swiss-Prot
    B2KFU4, Q3U5A6, Q69Z34, Q91X21, Q9CY11
    Related
    ENSMUSP00000099522.2, ENSMUST00000103232.2
    Conserved Domains (1) summary
    pfam10222
    Location:6 → 629
    DUF2152; Uncharacterized conserved protein (DUF2152)

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000070.7 Reference GRCm39 C57BL/6J

    Range
    148023849..148031773
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_006539279.5 → XP_006539342.1  uncharacterized protein KIAA2013 isoform X1

    Conserved Domains (1) summary
    pfam10222
    Location:6 → 629
    DUF2152; Uncharacterized conserved protein (DUF2152)
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q91X21.1 GenPept UniProtKB/Swiss-Prot:Q91X21

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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