U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

si:ch1073-464p5.2 si:ch1073-464p5.2 [ Danio rerio (zebrafish) ]

Gene ID: 791500, updated on 28-Oct-2024

Summary

Official Symbol
si:ch1073-464p5.2provided by ZNC
Official Full Name
si:ch1073-464p5.2provided by ZNC
Primary source
ZFIN:ZDB-GENE-230919-2
See related
Ensembl:ENSDARG00000020738 AllianceGenome:ZFIN:ZDB-GENE-230919-2
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See si:ch1073-464p5.2 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 3 NC_007114.7 (1037870..1045316)
105 previous assembly GRCz10 (GCF_000002035.5) 3 NC_007114.6 (1269086..1276667)

Chromosome 3 - NC_007114.7Genomic Context describing neighboring genes Neighboring gene zgc:172051 Neighboring gene GTPase IMAP family member 4-like Neighboring gene stonustoxin subunit alpha-like Neighboring gene zgc:172253 Neighboring gene zgc:153921 Neighboring gene si:ch1073-322p19.1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC791500

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076767.2NP_001070235.2  uncharacterized protein LOC791500 precursor

    Status: VALIDATED

    Source sequence(s)
    CU695221
    UniProtKB/TrEMBL
    A0A8M3B0L8, F1Q861, Q08BZ5
    Related
    ENSDARP00000019585.8, ENSDART00000011111.9

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007114.7 Reference GRCz11 Primary Assembly

    Range
    1037870..1045316
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005171510.5XP_005171567.1  uncharacterized protein LOC791500 isoform X1

    See identical proteins and their annotated locations for XP_005171567.1

    UniProtKB/TrEMBL
    A0A8M3B0L8, F1Q861, Q08BZ5
    Conserved Domains (1) summary
    pfam07837
    Location:242339
    FTCD_N; Formiminotransferase domain, N-terminal subdomain
  2. XM_009298983.4XP_009297258.1  uncharacterized protein LOC791500 isoform X1

    See identical proteins and their annotated locations for XP_009297258.1

    UniProtKB/TrEMBL
    A0A8M3B0L8, F1Q861, Q08BZ5
    Conserved Domains (1) summary
    pfam07837
    Location:242339
    FTCD_N; Formiminotransferase domain, N-terminal subdomain
  3. XM_068217699.1XP_068073800.1  uncharacterized protein LOC791500 isoform X2