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ncoa7a nuclear receptor coactivator 7a [ Danio rerio (zebrafish) ]

Gene ID: 792958, updated on 12-Sep-2024

Summary

Official Symbol
ncoa7aprovided by ZNC
Official Full Name
nuclear receptor coactivator 7aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-200102-1
See related
Ensembl:ENSDARG00000077559 AllianceGenome:ZFIN:ZDB-GENE-200102-1
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Orthologs
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Genomic context

See ncoa7a in Genome Data Viewer
Location:
chromosome: 16
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 16 NC_007127.7 (55059026..55076327)
105 previous assembly GRCz10 (GCF_000002035.5) 16 NC_007127.6 (55351744..55366019)

Chromosome 16 - NC_007127.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC137488001 Neighboring gene carnosine dipeptidase 1 Neighboring gene 5-azacytidine induced 2 Neighboring gene C-x(9)-C motif containing 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
uncharacterized protein LOC792958
Names
C2H2-type zinc finger protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001326597.1NP_001313526.1  uncharacterized protein LOC792958

    Status: VALIDATED

    Source sequence(s)
    CABZ01052289, CABZ01052290, LO017815
    UniProtKB/TrEMBL
    A0A8M1P952, E7FGS2
    Related
    ENSDARP00000100420.2, ENSDART00000109391.4
    Conserved Domains (1) summary
    smart00584
    Location:93255
    TLDc; domain in TBC and LysM domain containing proteins

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007127.7 Reference GRCz11 Primary Assembly

    Range
    55059026..55076327
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005169772.5XP_005169829.1  uncharacterized protein LOC792958 isoform X1

    UniProtKB/TrEMBL
    A0A8M2BHI8
    Conserved Domains (1) summary
    smart00584
    Location:54216
    TLDc; domain in TBC and LysM domain containing proteins