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pold2 polymerase (DNA directed), delta 2, regulatory subunit [ Danio rerio (zebrafish) ]

Gene ID: 796456, updated on 2-Nov-2024

Summary

Official Symbol
pold2provided by ZNC
Official Full Name
polymerase (DNA directed), delta 2, regulatory subunitprovided by ZNC
Primary source
ZFIN:ZDB-GENE-030616-157
See related
Ensembl:ENSDARG00000095046 AllianceGenome:ZFIN:ZDB-GENE-030616-157
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:55633; zgc:77043; si:dz150f13.3
Summary
Predicted to enable DNA binding activity. Predicted to be involved in DNA strand elongation involved in DNA replication. Predicted to act upstream of or within DNA replication. Predicted to be located in nucleus. Predicted to be part of delta DNA polymerase complex. Orthologous to human POLD2 (DNA polymerase delta 2, accessory subunit). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
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Genomic context

See pold2 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 8 NC_007119.7 (36570533..36579527)
105 previous assembly GRCz10 (GCF_000002035.5) 8 NC_007119.6 (36538099..36547093)

Chromosome 8 - NC_007119.7Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 157 Neighboring gene splicing factor 3a, subunit 1 Neighboring gene 5S ribosomal RNA Neighboring gene polyglutamine binding protein 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC55633, MGC77043

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within DNA replication IEA
Inferred from Electronic Annotation
more info
 
involved_in DNA strand elongation involved in DNA replication IBA
Inferred from Biological aspect of Ancestor
more info
 
Component Evidence Code Pubs
part_of delta DNA polymerase complex IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
DNA polymerase delta subunit 2
NP_998468.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_213303.1NP_998468.1  DNA polymerase delta subunit 2

    See identical proteins and their annotated locations for NP_998468.1

    Status: PROVISIONAL

    Source sequence(s)
    BC066617
    UniProtKB/TrEMBL
    Q90X40
    Related
    ENSDARP00000122064.1, ENSDART00000145868.3
    Conserved Domains (1) summary
    cd07387
    Location:193450
    MPP_PolD2_C; PolD2 (DNA polymerase delta, subunit 2), C-terminal domain

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007119.7 Reference GRCz11 Primary Assembly

    Range
    36570533..36579527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)