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abhd6a abhydrolase domain containing 6, acylglycerol lipase a [ Danio rerio (zebrafish) ]

Gene ID: 799085, updated on 2-Nov-2024

Summary

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Official Symbol
abhd6aprovided by ZNC
Official Full Name
abhydrolase domain containing 6, acylglycerol lipase aprovided by ZNC
Primary source
ZFIN:ZDB-GENE-090925-1
See related
Ensembl:ENSDARG00000060756 AllianceGenome:ZFIN:ZDB-GENE-090925-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable monoacylglycerol lipase activity. Predicted to be involved in acylglycerol catabolic process. Predicted to be part of AMPA glutamate receptor complex. Predicted to be active in membrane. Orthologous to human ABHD6 (abhydrolase domain containing 6, acylglycerol lipase). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs
human mouse all
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Genomic context

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See abhd6a in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 11 NC_007122.7 (42075808..42099302, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 11 NC_007122.6 (41463337..41487354, complement)

Chromosome 11 - NC_007122.7Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC798783 Neighboring gene si:ch211-193l2.7 Neighboring gene transfer RNA serine (anticodon UGA) Neighboring gene protein SPMIP1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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Related articles in PubMed

  1. Evolution of gene function and regulatory control after whole-genome duplication: comparative analyses in vertebrates. Kassahn KS, et al. Genome Res, 2009 Aug. PMID 19439512, Free PMC Article
  2. 15000 unique zebrafish EST clusters and their future use in microarray for profiling gene expression patterns during embryogenesis. Lo J, et al. Genome Res, 2003 Mar. PMID 12618376, Free PMC Article
  3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables monoacylglycerol lipase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in acylglycerol catabolic process IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
part_of AMPA glutamate receptor complex IBA
Inferred from Biological aspect of Ancestor
more info
  
is_active_in membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
monoacylglycerol lipase ABHD6
Names
abhydrolase domain containing 6a
XP_001339480.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007122.7 Reference GRCz11 Primary Assembly

    Range
    42075808..42099302 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001339444.6 → XP_001339480.1  monoacylglycerol lipase ABHD6

    UniProtKB/TrEMBL
    A0A8M1Q7F5, E7F881
    Related
    ENSDARP00000142180.1, ENSDART00000173312.2
    Conserved Domains (2) summary
    COG0596
    Location:52 → 324
    MhpC; Pimeloyl-ACP methyl ester carboxylesterase [Coenzyme transport and metabolism, General function prediction only]
    cl21494
    Location:71 → 168
    Abhydrolase; alpha/beta hydrolases
Nucleotide Protein Strain
Heading Accession and Version

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