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scpl36 serine carboxypeptidase-like 36 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 824363, updated on 18-Sep-2024

Summary

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Official Symbol
scpl36
Official Full Name
serine carboxypeptidase-like 36
Primary source
TAIR:AT3G52000
Locus tag
AT3G52000
See related
Araport:AT3G52000
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
serine carboxypeptidase-like 36
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Genomic context

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See scpl36 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Sequence:
Chromosome: 3; NC_003074.8 (19293010..19294881)

Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene acyl-CoA sterol acyl transferase 1 Neighboring gene ARM repeat superfamily protein Neighboring gene Protein kinase superfamily protein Neighboring gene miscRNA Neighboring gene serine carboxypeptidase-like 37

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003074.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

GeneRIFs: Gene References Into Functions

General gene information

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NM_115059.3

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables serine-type carboxypeptidase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in mitochondrion ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
serine carboxypeptidase-like 36
NP_190768.1
  • serine carboxypeptidase-like 36 (scpl36); FUNCTIONS IN: serine-type carboxypeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: endomembrane system; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage; CONTAINS InterPro DOMAIN/s: Peptidase S10, serine carboxypeptidase (InterPro:IPR001563), Peptidase S10, serine carboxypeptidase, active site (InterPro:IPR018202); BEST Arabidopsis thaliana protein match is: serine carboxypeptidase-like 37 (TAIR:AT3G52010.1); Has 4030 Blast hits to 3970 proteins in 473 species: Archae - 0; Bacteria - 582; Metazoa - 647; Fungi - 872; Plants - 1453; Viruses - 0; Other Eukaryotes - 476 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003074.8 Reference assembly

    Range
    19293010..19294881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_115059.3 → NP_190768.1  serine carboxypeptidase-like 36 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_190768.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q9SV04
    UniProtKB/TrEMBL
    A0A178VAS5
    Conserved Domains (2) summary
    COG2939
    Location:16 → 473
    Kex1; Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
    pfam00450
    Location:68 → 475
    Peptidase_S10; Serine carboxypeptidase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9SV04.1

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