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NPC1 non-specific phospholipase C1 [ Arabidopsis thaliana (thale cress) ]

Gene ID: 837234, updated on 18-Sep-2024

Summary

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Official Symbol
NPC1
Official Full Name
non-specific phospholipase C1
Primary source
TAIR:AT1G07230
Locus tag
AT1G07230
See related
Araport:AT1G07230
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Arabidopsis thaliana (ecotype: Columbia)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
Also known as
F10K1.6; F10K1_6; non-specific phospholipase C1
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Genomic context

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See NPC1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
3
Sequence:
Chromosome: 1; NC_003070.9 (2220181..2223018, complement)

Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Ribosomal protein S18 Neighboring gene O-glucosyltransferase rumi-like protein (DUF821) Neighboring gene ncRNA Neighboring gene UDP-glucosyl transferase 71C5 Neighboring gene UDP-glucosyl transferase 71C4 Neighboring gene UDP-glucosyl transferase 71C3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003070.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Separating Golgi Proteins from Cis to Trans Reveals Underlying Properties of Cisternal Localization. Parsons HT, et al. Plant Cell, 2019 Sep. PMID 31266899, Free PMC Article
  2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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NM_100597.4

Gene Ontology Provided by TAIR

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Component Evidence Code Pubs
located_in Golgi cis cisterna HDA PubMed 
located_in plasma membrane ISM
Inferred from Sequence Model
more info
  

General protein information

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Preferred Names
non-specific phospholipase C1
NP_172203.2
  • non-specific phospholipase C1 (NPC1); FUNCTIONS IN: hydrolase activity, acting on ester bonds; LOCATED IN: endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phosphoesterase (InterPro:IPR007312); BEST Arabidopsis thaliana protein match is: non-specific phospholipase C2 (TAIR:AT2G26870.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003070.9 Reference assembly

    Range
    2220181..2223018 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_100597.4 → NP_172203.2  non-specific phospholipase C1 [Arabidopsis thaliana]

    See identical proteins and their annotated locations for NP_172203.2

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8L7Y9, Q9LML5
    UniProtKB/TrEMBL
    A0A178WNQ8, A0A5S9T285, A0A654E9I2
    Conserved Domains (1) summary
    pfam04185
    Location:38 → 396
    Phosphoesterase; Phosphoesterase family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q8L7Y9.1

Gene LinkOut

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