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METTL26 methyltransferase like 26 [ Homo sapiens (human) ]

Gene ID: 84326, updated on 10-Oct-2024

Summary

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Official Symbol
METTL26provided by HGNC
Official Full Name
methyltransferase like 26provided by HGNC
Primary source
HGNC:HGNC:14141
See related
Ensembl:ENSG00000130731 AllianceGenome:HGNC:14141
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
JFP2; C16orf13
Expression
Ubiquitous expression in kidney (RPKM 12.8), ovary (RPKM 12.0) and 25 other tissues See more
Orthologs
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Genomic context

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See METTL26 in Genome Data Viewer
Location:
16p13.3
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (634430..636305, complement)
RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (638463..640372, complement)
RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (684430..686305, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene RAB40C, member RAS oncogene family Neighboring gene uncharacterized LOC124903618 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6927 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10208 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:671701-672454 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:677407-678140 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:679610-680343 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:680344-681078 Neighboring gene WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:685245-685904 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6928 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 6929 Neighboring gene uncharacterized LOC100287175 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:687335-688109 Neighboring gene tRNA-Gly (anticodon CCC) 2-2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: HPA RNA-seq normal tissues HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Apr 4 07:08:55 2018

Bibliography

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Related articles in PubMed

  1. Sequence, structure and pathology of the fully annotated terminal 2 Mb of the short arm of human chromosome 16. Daniels RJ, et al. Hum Mol Genet, 2001 Feb 15. PMID 11157797
  2. Reversible oxidation of phosphatase and tensin homolog (PTEN) alters its interactions with signaling and regulatory proteins. Verrastro I, et al. Free Radic Biol Med, 2016 Jan. PMID 26561776
  3. Endogenous Cell Type-Specific Disrupted in Schizophrenia 1 Interactomes Reveal Protein Networks Associated With Neurodevelopmental Disorders. Wilkinson B, et al. Biol Psychiatry, 2019 Feb 15. PMID 29961565, Free PMC Article
  4. SNX27-driven membrane localisation of OTULIN antagonises linear ubiquitination and NF-κB signalling activation. Shi R, et al. Cell Biosci, 2021 Jul 27. PMID 34315543, Free PMC Article
  5. Transcriptome analysis of human gastric cancer. Oh JH, et al. Mamm Genome, 2005 Dec. PMID 16341674

See all (11) citations in PubMed

GeneRIFs: Gene References Into Functions

Phenotypes

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Find tests for this gene in the NIH Genetic Testing Registry (GTR)

Review eQTL and phenotype association data in this region using PheGenI

Variation

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See Variation Viewer (GRCh37.p13)

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Clone Names

  • MGC13114

General protein information

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Preferred Names
methyltransferase-like 26
Names
UPF0585 protein C16orf13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001040160.3 → NP_001035250.1  methyltransferase-like 26 isoform b

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) lacks an exon in the central coding region, which results in a frameshift, compared to variant 1. The encoded isoform (b) has a longer and distinct C-terminus, compared to isoform a.
    Source sequence(s)
    AK295628, BU539308, DB499720
    Consensus CDS
    CCDS42091.1
    UniProtKB/Swiss-Prot
    Q96S19
    Related
    ENSP00000440765.2, ENST00000397666.6
    Conserved Domains (1) summary
    cl17173
    Location:4 → 140
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. NM_001040161.3 → NP_001035251.1  methyltransferase-like 26 isoform c

    See identical proteins and their annotated locations for NP_001035251.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (3) lacks three exons in the central coding region, compared to variant 1. The encoded isoform (c) is shorter, compared to isoform a.
    Source sequence(s)
    BC007207
    Consensus CDS
    CCDS32352.1
    UniProtKB/Swiss-Prot
    Q96S19
    Related
    ENSP00000444140.2, ENST00000338401.8
    Conserved Domains (1) summary
    cl17173
    Location:4 → 106
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. NM_001040162.3 → NP_001035252.1  methyltransferase-like 26 isoform d

    See identical proteins and their annotated locations for NP_001035252.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (4) lacks two exons in the central coding region, which results in a frameshift, compared to variant 1. The encoded isoform (d) is shorter and has a distinct internal segment, compared to isoform a.
    Source sequence(s)
    BM827705, BU539308, DB499720
    Consensus CDS
    CCDS45367.1
    UniProtKB/Swiss-Prot
    Q96S19
    Related
    ENSP00000440475.2, ENST00000397664.8
    Conserved Domains (1) summary
    cl17173
    Location:4 → 126
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  4. NM_001040165.3 → NP_001035255.1  methyltransferase-like 26 isoform g

    Status: VALIDATED

    Description
    Transcript Variant: This variant (7) lacks two exons in the central coding region, which results in a frameshift, compared to variant 1. The encoded isoform (g) is shorter and has a distinct C-terminus, compared to isoform a.
    Source sequence(s)
    AI146806, BU539308, DB499720
    Consensus CDS
    CCDS42090.1
    UniProtKB/Swiss-Prot
    Q96S19
    Related
    ENSP00000444460.2, ENST00000397665.6
    Conserved Domains (1) summary
    cl17173
    Location:4 → 134
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  5. NM_001288710.2 → NP_001275639.1  methyltransferase-like 26 isoform h

    Status: VALIDATED

    Description
    Transcript Variant: This variant (9) lacks an in-frame exon in the central coding region, compared to variant 1. The encoded isoform (h) is shorter, compared to isoform 1.
    Source sequence(s)
    BP273946, BU539308, DB499720
    Consensus CDS
    CCDS73798.1
    UniProtKB/TrEMBL
    A0A087WYU2
    Related
    ENSP00000482089.1, ENST00000614890.4
    Conserved Domains (1) summary
    cl17173
    Location:4 → 183
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  6. NM_032366.5 → NP_115742.3  methyltransferase-like 26 isoform a

    See identical proteins and their annotated locations for NP_115742.3

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) encodes isoform a.
    Source sequence(s)
    AK294482, DB499720
    Consensus CDS
    CCDS45368.1
    UniProtKB/Swiss-Prot
    A8MTR1, A8MWJ8, A8MZA1, B4DG95, B4DIJ3, D6REA6, F6TF62, F6VM53, Q96IW1, Q96MD6, Q96S19
    Related
    ENSP00000445926.2, ENST00000301686.13
    Conserved Domains (1) summary
    pfam06080
    Location:4 → 203
    DUF938; Protein of unknown function (DUF938)

RNA

  1. NR_109976.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (5) lacks an internal exon and uses an alternate splice site at an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AW027232, BU539308, DB499720

  2. NR_109977.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (6) lacks an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AK294482, DB499720
    Related
    ENST00000568077.5

  3. NR_109978.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (8) uses an alternate splice site at an internal exon, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    AK294482, BI762987, BU539308, DB499720
    Related
    ENST00000456420.6

  4. NR_109979.2 RNA Sequence

    Status: VALIDATED

    Description
    Transcript Variant: This variant (10) lacks two internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon, as used in variant 1, renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
    Source sequence(s)
    BU539308, DB499720

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    634430..636305 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_011522714.3 → XP_011521016.1  methyltransferase-like 26 isoform X2

    UniProtKB/TrEMBL
    H3BNB2
    Conserved Domains (1) summary
    cl17173
    Location:4 → 120
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_011522713.3 → XP_011521015.1  methyltransferase-like 26 isoform X1

    Conserved Domains (1) summary
    cl17173
    Location:4 → 270
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  3. XM_047434800.1 → XP_047290756.1  methyltransferase-like 26 isoform X3

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    638463..640372 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054314190.1 → XP_054170165.1  methyltransferase-like 26 isoform X2

  2. XM_054314189.1 → XP_054170164.1  methyltransferase-like 26 isoform X1

  3. XM_054314191.1 → XP_054170166.1  methyltransferase-like 26 isoform X3

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001040163.1: Suppressed sequence

    Description
    NM_001040163.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.

  2. NM_001040164.1: Suppressed sequence

    Description
    NM_001040164.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.

  3. NM_001040166.1: Suppressed sequence

    Description
    NM_001040166.1: This RefSeq was permanently suppressed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q96S19.2 GenPept UniProtKB/Swiss-Prot:Q96S19

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