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ATC1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 851765, updated on 11-Sep-2024

Summary

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Official Symbol
ATC1
Primary source
SGD:S000002592
Locus tag
YDR184C
See related
AllianceGenome:SGD:S000002592; FungiDB:YDR184C; VEuPathDB:YDR184C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
LIC4
Summary
Involved in bipolar cellular bud site selection and cellular cation homeostasis. Located in nucleus. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (830629..831513, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Plp1p Neighboring gene Ups3p Neighboring gene Snd1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001136.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ARL1 participates with ATC1/LIC4 to regulate responses of yeast cells to ions. Munson AM, et al. Biochem Biophys Res Commun, 2004 Mar 12. PMID 14975746
  2. Mutational and hyperexpression-induced disruption of bipolar budding in yeast. Freedman T, et al. Microbiology (Reading), 2000 Nov. PMID 11065362
  3. A novel pathway that coordinates mitotic exit with spindle position. Nelson SA, et al. Mol Biol Cell, 2007 Sep. PMID 17615297, Free PMC Article
  4. Lic4, a nuclear phosphoprotein that cooperates with calcineurin to regulate cation homeostasis in Saccharomyces cerevisiae. Hemenway CS, et al. Mol Gen Genet, 1999 Mar. PMID 10102375
  5. Yeast ARL1 encodes a regulator of K+ influx. Munson AM, et al. J Cell Sci, 2004 May 1. PMID 15126631

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in bipolar cellular bud site selection IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in intracellular monoatomic cation homeostasis IMP
Inferred from Mutant Phenotype
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
located_in nucleus HDA PubMed 
located_in nucleus IDA
Inferred from Direct Assay
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Atc1p
NP_010470.1
  • Nuclear protein; possibly involved in regulation of cation stress responses and/or in the establishment of bipolar budding pattern; relative distribution to the nucleus decreases upon DNA replication stress

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    830629..831513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180492.1 → NP_010470.1  TPA: Atc1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010470.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VSG8, Q04005, Q6Q540
    UniProtKB/TrEMBL
    A6ZYE4, B3LG97, B5VG78, C8Z599, N1P8C9
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04005.1

Gene LinkOut

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