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SND1 Snd1p [ Saccharomyces cerevisiae S288C ]

Gene ID: 851767, updated on 1-Aug-2024

Summary

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Gene symbol
SND1
Gene description
Snd1p
Primary source
FungiDB:YDR186C
Locus tag
YDR186C
See related
SGD:S000002594; AllianceGenome:SGD:S000002594; VEuPathDB:YDR186C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be involved in protein transport. Located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See SND1 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_001136.10 (832859..835492, complement)

Chromosome IV - NC_001136.10Genomic Context describing neighboring genes Neighboring gene Atc1p Neighboring gene Ups3p Neighboring gene chaperonin-containing T-complex subunit CCT6 Neighboring gene syntaxin-binding protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001136.10

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Snd3 controls nucleus-vacuole junctions in response to glucose signaling. Tosal-Castano S, et al. Cell Rep, 2021 Jan 19. PMID 33472077
  2. Interaction of CK1δ with γTuSC ensures proper microtubule assembly and spindle positioning. Peng Y, et al. Mol Biol Cell, 2015 Jul 1. PMID 25971801, Free PMC Article
  3. Systematic identification and functional screens of uncharacterized proteins associated with eukaryotic ribosomal complexes. Fleischer TC, et al. Genes Dev, 2006 May 15. PMID 16702403, Free PMC Article
  4. Ist2 recruits the lipid transporters Osh6/7 to ER-PM contacts to maintain phospholipid metabolism. Wong AKO, et al. J Cell Biol, 2021 Sep 6. PMID 34259806, Free PMC Article
  5. Snx4-assisted vacuolar targeting of transcription factors defines a new autophagy pathway for controlling ATG expression. Hanley SE, et al. Autophagy, 2021 Nov. PMID 33678121, Free PMC Article

See all (32) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in protein transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
Snd1p
NP_010472.3
  • Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001136.10 Reference assembly

    Range
    832859..835492 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001180494.3 → NP_010472.3  TPA: Snd1p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010472.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VSH0, Q04007
    UniProtKB/TrEMBL
    B3LG95, C7GN10
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04007.1

Gene LinkOut

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