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PAU24 seripauperin PAU24 [ Saccharomyces cerevisiae S288C ]

Gene ID: 852603, updated on 17-May-2024

Summary

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Gene symbol
PAU24
Gene description
seripauperin PAU24
Primary source
FungiDB:YBR301W
Locus tag
YBR301W
See related
SGD:S000000505; AllianceGenome:SGD:S000000505; VEuPathDB:YBR301W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
DAN3
Summary
Predicted to be a structural constituent of cell wall. Predicted to be involved in fungal-type cell wall organization. Predicted to be located in extracellular region. Predicted to be active in fungal-type cell wall. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See PAU24 in Genome Data Viewer
Location:
chromosome: II
Exon count:
1
Sequence:
Chromosome: II; NC_001134.8 (809057..809419)

Chromosome II - NC_001134.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene alpha-glucosidase MAL32 Neighboring gene Cos2p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001134.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of a novel deletion mutant strain in Saccharomyces cerevisiae that results in a microsatellite instability phenotype. Ji HP, et al. Biodiscovery, 2012 Jul 23. PMID 23667739, Free PMC Article
  2. The DAN1 gene of S. cerevisiae is regulated in parallel with the hypoxic genes, but by a different mechanism. Sertil O, et al. Gene, 1997 Jun 19. PMID 9224891
  3. Deletion of new covalently linked cell wall glycoproteins alters the electrophoretic mobility of phosphorylated wall components of Saccharomyces cerevisiae. Mrsa V, et al. J Bacteriol, 1999 May. PMID 10322008, Free PMC Article
  4. Reciprocal regulation of anaerobic and aerobic cell wall mannoprotein gene expression in Saccharomyces cerevisiae. Abramova N, et al. J Bacteriol, 2001 May. PMID 11292809, Free PMC Article
  5. Low oxygen levels as a trigger for enhancement of respiratory metabolism in Saccharomyces cerevisiae. Rintala E, et al. BMC Genomics, 2009 Oct 5. PMID 19804647, Free PMC Article

See all (17) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables structural constituent of cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in cell wall organization IEA
Inferred from Electronic Annotation
more info
  
involved_in fungal-type cell wall organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
  
is_active_in fungal-type cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in fungal-type cell wall ISS
Inferred from Sequence or Structural Similarity
more info
 PubMed 

General protein information

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Preferred Names
seripauperin PAU24
NP_009860.3
  • Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001134.8 Reference assembly

    Range
    809057..809419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001178649.3 → NP_009860.3  TPA: seripauperin PAU24 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_009860.3

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VQU6, P38155
    UniProtKB/TrEMBL
    A0A8H4F9J9, A6ZUU6, G2W9V4, G2WF19
    Conserved Domains (1) summary
    pfam00660
    Location:26 → 115
    SRP1_TIP1; Seripauperin and TIP1 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38155.1

Gene LinkOut

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