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uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 853469, updated on 18-Sep-2024

Summary

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Official Full Name
uncharacterized protein
Primary source
SGD:S000003773
Locus tag
YJR012C
See related
AllianceGenome:SGD:S000003773; FungiDB:YJR012C; VEuPathDB:YJR012C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: X
Exon count:
1
Sequence:
Chromosome: X; NC_001142.9 (459795..460193, complement)

Chromosome X - NC_001142.9Genomic Context describing neighboring genes Neighboring gene signal peptidase complex subunit SPC1 Neighboring gene Cal4p Neighboring gene glycosylphosphatidylinositol-alpha 1,4 mannosyltransferase I Neighboring gene Tma22p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001142.9

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Highly parallel genome variant engineering with CRISPR-Cas9. Sadhu MJ, et al. Nat Genet, 2018 Apr. PMID 29632376, Free PMC Article
  2. Assigning function to yeast proteins by integration of technologies. Hazbun TR, et al. Mol Cell, 2003 Dec. PMID 14690591
  3. Comprehensive and quantitative mapping of RNA-protein interactions across a transcribed eukaryotic genome. She R, et al. Proc Natl Acad Sci U S A, 2017 Apr 4. PMID 28325876, Free PMC Article
  4. Functional profiling of the Saccharomyces cerevisiae genome. Giaever G, et al. Nature, 2002 Jul 25. PMID 12140549
  5. Complete nucleotide sequence of Saccharomyces cerevisiae chromosome X. Galibert F, et al. EMBO J, 1996 May 1. PMID 8641269, Free PMC Article

See all (13) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_012546.4
  • hypothetical protein; proposed involvement in transport based on mass spectrometry analysis of copurifying proteins; null mutant is viable

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001142.9 Reference assembly

    Range
    459795..460193 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001181670.4 → NP_012546.4  TPA: uncharacterized protein YJR012C [Saccharomyces cerevisiae S288C]

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VWI8, P47087
    UniProtKB/TrEMBL
    N1P8M5
    Conserved Domains (1) summary
    pfam17733
    Location:7 → 51
    DUF5572; Family of unknown function (DUF5572)
Nucleotide Protein
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