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SMF1 divalent metal ion transporter SMF1 [ Saccharomyces cerevisiae S288C ]

Gene ID: 854027, updated on 1-Aug-2024

Summary

Gene symbol
SMF1
Gene description
divalent metal ion transporter SMF1
Primary source
FungiDB:YOL122C
Locus tag
YOL122C
See related
SGD:S000005482; AllianceGenome:SGD:S000005482; VEuPathDB:YOL122C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
SBS1
Summary
Enables solute:proton symporter activity. Involved in cellular transition metal ion homeostasis and transition metal ion transport. Located in plasma membrane. Human ortholog(s) of this gene implicated in several diseases, including anemia (multiple); autoimmune disease (multiple); inflammatory bowel disease (multiple); leishmaniasis (multiple); and tuberculosis (multiple). Orthologous to human SLC11A1 (solute carrier family 11 member 1) and SLC11A2 (solute carrier family 11 member 2). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

See SMF1 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (89692..91419, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene tRNA (guanine-N2-)-methyltransferase Neighboring gene Hrp1p Neighboring gene ribosomal 40S subunit protein S19A Neighboring gene ribosomal 60S subunit protein L18A

Bibliography

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables cadmium ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables inorganic cation transmembrane transporter activity IDA
Inferred from Direct Assay
more info
PubMed 
enables manganese ion transmembrane transporter activity IBA
Inferred from Biological aspect of Ancestor
more info
 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
 
enables metal ion transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 
enables solute:proton symporter activity IDA
Inferred from Direct Assay
more info
PubMed 
Process Evidence Code Pubs
involved_in cadmium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in cadmium ion transport IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in copper ion transport IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in intracellular copper ion homeostasis IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in intracellular manganese ion homeostasis IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in intracellular manganese ion homeostasis IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in iron ion transmembrane transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in iron ion transport IGI
Inferred from Genetic Interaction
more info
PubMed 
involved_in manganese ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
involved_in manganese ion transport IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in manganese ion transport IMP
Inferred from Mutant Phenotype
more info
PubMed 
involved_in metal ion transport IEA
Inferred from Electronic Annotation
more info
 
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in fungal-type vacuole HDA PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in plasma membrane IDA
Inferred from Direct Assay
more info
PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
divalent metal ion transporter SMF1
NP_014519.1
  • Divalent metal ion transporter; broad specificity for di-valent and tri-valent metals; post-translationally regulated by levels of metal ions; member of the Nramp family of metal transport proteins

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    89692..91419 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183376.1NP_014519.1  TPA: divalent metal ion transporter SMF1 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014519.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W1U6, P38925
    UniProtKB/TrEMBL
    G2WMB5, N1NXC6
    Conserved Domains (1) summary
    TIGR01197
    Location:74490
    nramp; NRAMP (natural resistance-associated macrophage protein) metal ion transporters