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RPS15 ribosomal 40S subunit protein S15 [ Saccharomyces cerevisiae S288C ]

Gene ID: 854117, updated on 1-Aug-2024

Summary

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Gene symbol
RPS15
Gene description
ribosomal 40S subunit protein S15
Primary source
FungiDB:YOL040C
Locus tag
YOL040C
See related
SGD:S000005400; AllianceGenome:SGD:S000005400; VEuPathDB:YOL040C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Also known as
RPS21
Summary
Predicted to be a structural constituent of ribosome. Involved in rRNA export from nucleus. Predicted to be located in cytoplasm and ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human RPS15 (ribosomal protein S15). [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See RPS15 in Genome Data Viewer
Location:
chromosome: XV
Exon count:
1
Sequence:
Chromosome: XV; NC_001147.6 (253149..253577, complement)

Chromosome XV - NC_001147.6Genomic Context describing neighboring genes Neighboring gene RNA exonuclease Neighboring gene Nop12p Neighboring gene ribosomal protein P2A Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001147.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural determination of Saccharomyces cerevisiae rig gene and identification of its product as ribosomal protein S21. Takasawa S, et al. FEBS Lett, 1992 Aug 3. PMID 1644188
  2. Global nucleosome occupancy in yeast. Bernstein BE, et al. Genome Biol, 2004. PMID 15345046, Free PMC Article
  3. The C-terminal tail of ribosomal protein Rps15 is engaged in cytoplasmic pre-40S maturation. Rössler I, et al. RNA Biol, 2022. PMID 35438042, Free PMC Article
  4. A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling. Kasari V, et al. Nucleic Acids Res, 2019 Sep 19. PMID 31299085, Free PMC Article
  5. Genetic interactions show the importance of rRNA modification machinery for the role of Rps15p during ribosome biogenesis in S. cerevisiae. Bellemer C, et al. PLoS One, 2010 May 3. PMID 20454621, Free PMC Article

See all (86) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome IBA
Inferred from Biological aspect of Ancestor
more info
  
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
  
enables structural constituent of ribosome NAS
Non-traceable Author Statement
more info
 PubMed 
Process Evidence Code Pubs
involved_in cytoplasmic translation NAS
Non-traceable Author Statement
more info
 PubMed 
involved_in ribosomal small subunit assembly IBA
Inferred from Biological aspect of Ancestor
more info
  
involved_in ribosomal subunit export from nucleus IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
  
involved_in translation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  
part_of cytosolic small ribosomal subunit IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of cytosolic small ribosomal subunit NAS
Non-traceable Author Statement
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
  
located_in ribosome IEA
Inferred from Electronic Annotation
more info
  
part_of small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
ribosomal 40S subunit protein S15
NP_014602.1
  • Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15 and bacterial S19

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001147.6 Reference assembly

    Range
    253149..253577 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001183294.1 → NP_014602.1  TPA: ribosomal 40S subunit protein S15 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014602.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W226, Q01855
    UniProtKB/TrEMBL
    A6ZNG9, B3LJ18, C7GK09, C8ZHS4, G2WMJ3, N1NWC7
    Conserved Domains (1) summary
    PTZ00096
    Location:1 → 140
    PTZ00096; 40S ribosomal protein S15; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q01855.1

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