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STB2 [ Saccharomyces cerevisiae S288C ]

Gene ID: 855075, updated on 11-Sep-2024

Summary

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Official Symbol
STB2
Primary source
SGD:S000004657
Locus tag
YMR053C
See related
AllianceGenome:SGD:S000004657; FungiDB:YMR053C; VEuPathDB:YMR053C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Part of Sin3-type complex. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (380346..382898, complement)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene tRNA-Trp Neighboring gene Far3p Neighboring gene H(+)-transporting V0 sector ATPase subunit a Neighboring gene Bub2p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A large protein complex containing the yeast Sin3p and Rpd3p transcriptional regulators. Kasten MM, et al. Mol Cell Biol, 1997 Aug. PMID 9234741, Free PMC Article
  2. Identification of the Saccharomyces cerevisiae genes STB1-STB5 encoding Sin3p binding proteins. Kasten MM, et al. Mol Gen Genet, 1997 Oct. PMID 9393435
  3. A nutrient-responsive pathway that determines M phase timing through control of B-cyclin mRNA stability. Messier V, et al. Cell, 2013 May 23. PMID 23706744
  4. The Saccharomyces cerevisiae Nrd1-Nab3 transcription termination pathway acts in opposition to Ras signaling and mediates response to nutrient depletion. Darby MM, et al. Mol Cell Biol, 2012 May. PMID 22431520, Free PMC Article
  5. Assigning function to yeast proteins by integration of technologies. Hazbun TR, et al. Mol Cell, 2003 Dec. PMID 14690591

See all (29) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
part_of Sin3-type complex IBA
Inferred from Biological aspect of Ancestor
more info
  
part_of Sin3-type complex IDA
Inferred from Direct Assay
more info
 PubMed 
part_of Sin3-type complex IPI
Inferred from Physical Interaction
more info
 PubMed 

General protein information

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Preferred Names
Stb2p
NP_013769.1
  • Protein that interacts with Sin3p in a two-hybrid assay; part of a large protein complex with Sin3p and Stb1p; STB2 has a paralog, STB6, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    380346..382898 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182551.1 → NP_013769.1  TPA: Stb2p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013769.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZM8, P46679
    UniProtKB/TrEMBL
    C8ZEQ6, N1P079
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P46679.2

Gene LinkOut

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