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GAT2 Gat2p [ Saccharomyces cerevisiae S288C ]

Gene ID: 855167, updated on 1-Aug-2024

Summary

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Gene symbol
GAT2
Gene description
Gat2p
Primary source
FungiDB:YMR136W
Locus tag
YMR136W
See related
SGD:S000004744; AllianceGenome:SGD:S000004744; VEuPathDB:YMR136W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in regulation of transcription by RNA polymerase II. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See GAT2 in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (541199..542881)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Erg29p Neighboring gene glucose-induced degradation complex subunit GID8 Neighboring gene DNA cross-link repair protein PSO2 Neighboring gene Arf family GTPase CIN4

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Microbial evolution. Global epistasis makes adaptation predictable despite sequence-level stochasticity. Kryazhimskiy S, et al. Science, 2014 Jun 27. PMID 24970088, Free PMC Article
  2. Genome-wide transcriptional analysis in S. cerevisiae by mini-array membrane hybridization. Cox KH, et al. Yeast, 1999 Jun 15. PMID 10392447
  3. Four Acyltransferases Uniquely Contribute to Phospholipid Heterogeneity in Saccharomyces cerevisiae. Oelkers P, et al. Lipid Insights, 2016. PMID 27920551, Free PMC Article
  4. Accumulation of lipid production in Chlorella minutissima by triacylglycerol biosynthesis-related genes cloned from Saccharomyces cerevisiae and Yarrowia lipolytica. Hsieh HJ, et al. J Microbiol, 2012 Jun. PMID 22752918
  5. The zinc cluster protein Sut1 contributes to filamentation in Saccharomyces cerevisiae. Foster HA, et al. Eukaryot Cell, 2013 Feb. PMID 23223039, Free PMC Article

See all (30) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity, RNA polymerase II-specific ISA
Inferred from Sequence Alignment
more info
 PubMed 
enables metal ion binding IEA
Inferred from Electronic Annotation
more info
  
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
  
enables zinc ion binding RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
involved_in regulation of transcription by RNA polymerase II ISA
Inferred from Sequence Alignment
more info
 PubMed 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
Gat2p
NP_013856.1
  • Protein containing GATA family zinc finger motifs; similar to Gln3p and Dal80p; expression repressed by leucine

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    541199..542881
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182638.1 → NP_013856.1  TPA: Gat2p [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013856.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6VZV9, P40209
    UniProtKB/TrEMBL
    B5VPR4
    Conserved Domains (1) summary
    COG5641
    Location:25 → 551
    GAT1; GATA Zn-finger-containing transcription factor [Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40209.1

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