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YMR196W uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 855236, updated on 29-Jun-2024

Summary

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Gene symbol
YMR196W
Gene description
uncharacterized protein
Primary source
FungiDB:YMR196W
Locus tag
YMR196W
See related
SGD:S000004809; AllianceGenome:SGD:S000004809; VEuPathDB:YMR196W
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to enable Glc3Man9GlcNAc2 oligosaccharide glucosidase activity. Predicted to be involved in oligosaccharide metabolic process. Located in cytoplasm. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See YMR196W in Genome Data Viewer
Location:
chromosome: XIII
Exon count:
1
Sequence:
Chromosome: XIII; NC_001145.3 (655076..658342)

Chromosome XIII - NC_001145.3Genomic Context describing neighboring genes Neighboring gene Cmc4p Neighboring gene Icy1p Neighboring gene v-SNARE protein VTI1 Neighboring gene Cik1p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001145.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Yeast DNA Damage Checkpoint Kinase Rad53 Targets the Exoribonuclease, Xrn1. Lao JP, et al. G3 (Bethesda), 2018 Dec 10. PMID 30377154, Free PMC Article
  2. Characterization of the rapamycin-sensitive phosphoproteome reveals that Sch9 is a central coordinator of protein synthesis. Huber A, et al. Genes Dev, 2009 Aug 15. PMID 19684113, Free PMC Article
  3. Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis. Lin YY, et al. Cell, 2009 Mar 20. PMID 19303850, Free PMC Article
  4. Cell-cycle regulation of formin-mediated actin cable assembly. Miao Y, et al. Proc Natl Acad Sci U S A, 2013 Nov 19. PMID 24133141, Free PMC Article
  5. A visual screen of protein localization during sporulation identifies new components of prospore membrane-associated complexes in budding yeast. Lam C, et al. Eukaryot Cell, 2014 Mar. PMID 24390141, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables Glc3Man9GlcNAc2 oligosaccharide glucosidase activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables Glc3Man9GlcNAc2 oligosaccharide glucosidase activity IEA
Inferred from Electronic Annotation
more info
  
enables hydrolase activity, hydrolyzing O-glycosyl compounds IEA
Inferred from Electronic Annotation
more info
  
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in oligosaccharide metabolic process IEA
Inferred from Electronic Annotation
more info
  
involved_in protein N-linked glycosylation IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
located_in cytoplasm HDA PubMed 

General protein information

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Preferred Names
uncharacterized protein
NP_013923.1
  • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YMR196W is not an essential gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001145.3 Reference assembly

    Range
    655076..658342
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182703.1 → NP_013923.1  TPA: uncharacterized protein YMR196W [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_013923.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D6W021, Q04336
    UniProtKB/TrEMBL
    A0A8H4BYY2, B3LM84, C7GRF5, G2WKQ2, N1P0H6
    Conserved Domains (1) summary
    cl17346
    Location:476 → 936
    Trehalase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q04336.1

Gene LinkOut

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