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YNL058C uncharacterized protein [ Saccharomyces cerevisiae S288C ]

Gene ID: 855667, updated on 1-Aug-2024

Summary

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Gene symbol
YNL058C
Gene description
uncharacterized protein
Primary source
FungiDB:YNL058C
Locus tag
YNL058C
See related
SGD:S000005003; AllianceGenome:SGD:S000005003; VEuPathDB:YNL058C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Located in endoplasmic reticulum and fungal-type vacuole. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See YNL058C in Genome Data Viewer
Location:
chromosome: XIV
Exon count:
1
Sequence:
Chromosome: XIV; NC_001146.8 (515763..516713, complement)

Chromosome XIV - NC_001146.8Genomic Context describing neighboring genes Neighboring gene rRNA (cytosine-C5-)-methyltransferase NOP2 Neighboring gene Arp5p Neighboring gene Oca2p Neighboring gene porin POR1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001146.8

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Cell cycle and checkpoint regulation of histone H3 K56 acetylation by Hst3 and Hst4. Maas NL, et al. Mol Cell, 2006 Jul 7. PMID 16818235
  2. New Aspects of Invasive Growth Regulation Identified by Functional Profiling of MAPK Pathway Targets in Saccharomyces cerevisiae. Vandermeulen MD, et al. Genetics, 2020 Sep. PMID 32665277, Free PMC Article
  3. Interaction of CK1δ with γTuSC ensures proper microtubule assembly and spindle positioning. Peng Y, et al. Mol Biol Cell, 2015 Jul 1. PMID 25971801, Free PMC Article
  4. A genomic approach for the identification and classification of genes involved in cell wall formation and its regulation in Saccharomyces cerevisiae. de Groot PW, et al. Comp Funct Genomics, 2001. PMID 18628907, Free PMC Article
  5. Genome-wide survey of yeast mutations leading to activation of the yeast cell integrity MAPK pathway: novel insights into diverse MAPK outcomes. Arias P, et al. BMC Genomics, 2011 Aug 2. PMID 21810245, Free PMC Article

See all (31) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular bud neck IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in endoplasmic reticulum HDA PubMed 
located_in fungal-type vacuole HDA PubMed 
is_active_in fungal-type vacuole IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuolar membrane IEA
Inferred from Electronic Annotation
more info
  
located_in vacuole IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_014340.1
  • hypothetical protein; green fluorescent protein (GFP)-fusion protein localizes to vacuole; not an essential gene; YNL058C has a paralog, PRM5, that arose from the whole genome duplication

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001146.8 Reference assembly

    Range
    515763..516713 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001182897.1 → NP_014340.1  TPA: uncharacterized protein YNL058C [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_014340.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    B3LNR8, C7GLU4, C8ZGH0, D6W1C1, E7KTL7, E7LZK9, E7QK11, P53947
    UniProtKB/TrEMBL
    N1NWN1
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P53947.1

Gene LinkOut

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