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PAU13 seripauperin PAU13 [ Saccharomyces cerevisiae S288C ]

Gene ID: 856339, updated on 1-Aug-2024

Summary

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Gene symbol
PAU13
Gene description
seripauperin PAU13
Primary source
FungiDB:YHL046C
Locus tag
YHL046C
See related
SGD:S000001038; AllianceGenome:SGD:S000001038; VEuPathDB:YHL046C
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be a structural constituent of cell wall. Predicted to be involved in fungal-type cell wall organization. Predicted to be active in fungal-type cell wall. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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See PAU13 in Genome Data Viewer
Location:
chromosome: VIII
Exon count:
1
Sequence:
Chromosome: VIII; NC_001140.6 (11923..12285, complement)

Chromosome VIII - NC_001140.6Genomic Context describing neighboring genes Neighboring gene Cos8p Neighboring gene siderophore transporter Neighboring gene Pxp3p Neighboring gene DUP240 family protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001140.6

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Global gene expression during short-term ethanol stress in Saccharomyces cerevisiae. Alexandre H, et al. FEBS Lett, 2001 Jun 1. PMID 11389906
  2. Set4 regulates stress response genes and coordinates histone deacetylases within yeast subtelomeres. Jethmalani Y, et al. Life Sci Alliance, 2021 Dec. PMID 34625508, Free PMC Article
  3. Functional analyses of PAU genes in Saccharomyces cerevisiae. Luo Z, et al. Microbiology (Reading), 2009 Dec. PMID 19762443
  4. Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Fisk DG, et al. Yeast, 2006 Sep. PMID 17001629, Free PMC Article
  5. Yeast Ssd1 is a non-enzymatic member of the RNase II family with an alternative RNA recognition site. Bayne RA, et al. Nucleic Acids Res, 2022 Mar 21. PMID 34302485, Free PMC Article

See all (24) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
enables structural constituent of cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
involved_in fungal-type cell wall organization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
is_active_in fungal-type cell wall IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

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Preferred Names
seripauperin PAU13
NP_011817.1
  • hypothetical protein; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expression is induced after ethanol shock; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001140.6 Reference assembly

    Range
    11923..12285 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001179126.1 → NP_011817.1  TPA: seripauperin PAU13 [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_011817.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    D3DKS5, P38725
    UniProtKB/TrEMBL
    A6ZKJ1, A6ZX85, B3LFD1, C8ZA19, G2WBR8, G2WFW8, G2WFX5
    Conserved Domains (1) summary
    pfam00660
    Location:26 → 115
    SRP1_TIP1; Seripauperin and TIP1 family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P38725.1

Gene LinkOut

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