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[ Saccharomyces cerevisiae S288C ]

Gene ID: 856762, updated on 11-Sep-2024

Summary

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Primary source
SGD:S000007226
Locus tag
YER039C-A
See related
AllianceGenome:SGD:S000007226; FungiDB:YER039C-A; VEuPathDB:YER039C-A
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Saccharomyces cerevisiae S288C (strain: S288C)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Saccharomycetaceae; Saccharomyces
Summary
Predicted to be located in membrane. Predicted to be integral component of membrane. [provided by Alliance of Genome Resources, Apr 2022]
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Genomic context

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Location:
chromosome: V
Exon count:
1
Sequence:
Chromosome: V; NC_001137.3 (229263..229481, complement)

Chromosome V - NC_001137.3Genomic Context describing neighboring genes Neighboring gene Smc5-Smc6 complex subunit KRE29 Neighboring gene Fmp49p Neighboring gene putative GDP-mannose transporter Neighboring gene nitrogen-responsive transcriptional regulator GLN3 Neighboring gene crossover junction endodeoxyribonuclease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_001137.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Saccharomyces cerevisiae S288C genome annotation: a working hypothesis. Fisk DG, et al. Yeast, 2006 Sep. PMID 17001629, Free PMC Article
  2. The nucleotide sequence of Saccharomyces cerevisiae chromosome V. Dietrich FS, et al. Nature, 1997 May 29. PMID 9169868, Free PMC Article
  3. Diverse cellular functions of the Hsp90 molecular chaperone uncovered using systems approaches. McClellan AJ, et al. Cell, 2007 Oct 5. PMID 17923092
  4. A Functional Link Between Bir1 and the Saccharomyces cerevisiae Ctf19 Kinetochore Complex Revealed Through Quantitative Fitness Analysis. Makrantoni V, et al. G3 (Bethesda), 2017 Sep 7. PMID 28754723, Free PMC Article
  5. A global genetic interaction network maps a wiring diagram of cellular function. Costanzo M, et al. Science, 2016 Sep 23. PMID 27708008, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Gene Ontology Provided by SGD

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein
NP_010957.1
  • hypothetical protein; YER039C-A is not an essential gene

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_001137.3 Reference assembly

    Range
    229263..229481 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NM_001184319.1 → NP_010957.1  TPA: uncharacterized protein YER039C-A [Saccharomyces cerevisiae S288C]

    See identical proteins and their annotated locations for NP_010957.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    A6ZQY8, B3LS52, C7GSI6, D3DLT9, P0CD97
    Conserved Domains (1) summary
    COG5070
    Location:10 → 72
    VRG4; Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P0CD97.1

Gene LinkOut

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