U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SBWP25_0035 internal virion protein with endolysin domain [ Pseudomonas phage phi-2 ]

Gene ID: 8673599, updated on 8-Jan-2023

Summary

Go to the top of the page Help
Gene symbol
SBWP25_0035
Gene description
internal virion protein with endolysin domain
Locus tag
SBWP25_0035
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pseudomonas phage phi-2 (strain: phi 2, nat-host: Pseudomonas fluorescens SBW25)
Lineage
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Autographiviridae; Krylovirinae; Tunggulvirus; Tunggulvirus f2
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_013638.1 (32547..35591)

NC_013638.1Genomic Context describing neighboring genes Neighboring gene internal virion protein Neighboring gene internal virion lysozyme motif Neighboring gene tail fiber protein Neighboring gene tail fiber assembly protein Neighboring gene terminase small subunit Neighboring gene terminase large subunit

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_013638.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Miscellaneous features

  • Loc: 33288-33305 PS00343 Gram-positive cocci surface proteins 'anchoring' hexapeptide. inference = protein motif:Prosite:PS00343

Repeated regions

  • Loc: 33595-33613

General protein information

Go to the top of the page Help
Preferred Names
internal virion protein with endolysin domain
YP_003345500.1
  • Putative internal virion protein, LKA1 gp48. Trimmed to first Met.

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_013638.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. YP_003345500.1 internal virion protein with endolysin domain [Pseudomonas phage phi-2]

    See identical proteins and their annotated locations for YP_003345500.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D2EBT9
    Conserved Domains (1) summary
    PHA03415
    Location:4 → 1013
    PHA03415; putative internal virion protein; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases