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DEHA2G23232g DEHA2G23232p [ Debaryomyces hansenii CBS767 ]

Gene ID: 8999302, updated on 17-May-2024

Summary

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Gene symbol
DEHA2G23232g
Gene description
DEHA2G23232p
Locus tag
DEHA2G23232g
See related
FungiDB:DEHA2G23232g; VEuPathDB:DEHA2G23232g
Gene type
protein coding
RNA name
DEHA2G23232p
RefSeq status
PROVISIONAL
Organism
Debaryomyces hansenii CBS767 (strain: CBS767, type-material: culture from type material of Debaryomyces hansenii)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Debaryomycetaceae; Debaryomyces
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Genomic context

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See DEHA2G23232g in Genome Data Viewer
Location:
chromosome: G
Exon count:
1
Sequence:
Chromosome: G; NC_006049.2 (1882002..1885499, complement)

Chromosome G - NC_006049.2Genomic Context describing neighboring genes Neighboring gene DEHA2G23188p Neighboring gene DEHA2G23210p Neighboring gene DEHA2G23254p Neighboring gene DEHA2G23276p

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_006049.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome evolution in yeasts. Dujon B, et al. Nature, 2004 Jul 1. PMID 15229592

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-directed 5'-3' RNA polymerase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ribonucleoside binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase III complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
DEHA2G23232p
XP_002777730.1
  • highly similar to uniprot|P22276 Saccharomyces cerevisiae YOR207C RET1 Second-largest subunit of RNA polymerase III which is responsible for the transcription of tRNA and 5S RNA genes and other low molecular weight RNAs

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_006049.2 Reference assembly

    Range
    1882002..1885499 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002777684.1 → XP_002777730.1  DEHA2G23232p [Debaryomyces hansenii CBS767]

    See identical proteins and their annotated locations for XP_002777730.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    B5RUZ7
    Conserved Domains (4) summary
    COG0085
    Location:37 → 1165
    RpoB; DNA-directed RNA polymerase, beta subunit/140 kD subunit [Transcription]
    cd00653
    Location:57 → 1160
    RNA_pol_B_RPB2; RNA polymerase beta subunit. RNA polymerases catalyse the DNA dependent polymerization of RNA. Prokaryotes contain a single RNA polymerase compared to three in eukaryotes (not including mitochondrial. and chloroplast polymerases). Each RNA polymerase ...
    pfam04566
    Location:562 → 622
    RNA_pol_Rpb2_4; RNA polymerase Rpb2, domain 4
    pfam04567
    Location:645 → 689
    RNA_pol_Rpb2_5; RNA polymerase Rpb2, domain 5
Nucleotide Protein
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