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sno52 [ Schizosaccharomyces pombe (fission yeast) ]

Gene ID: 90824252, updated on 11-Sep-2024

Summary

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Official Symbol
sno52
Primary source
PomBase:SPSNORNA.29
Locus tag
SPOM_SPSNORNA.29
Gene type
ncRNA
RNA name
snoRNA
Organism
Schizosaccharomyces pombe (strain: 972h-)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Taphrinomycotina; Schizosaccharomycetes; Schizosaccharomycetales; Schizosaccharomycetaceae; Schizosaccharomyces
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Genomic context

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See sno52 in Genome Data Viewer
Location:
chromosome: I
Exon count:
1
Sequence:
Chromosome: I; NC_003424.3 (339548..339642, complement)

Chromosome I - NC_003424.3Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene rRNA processing protein Neighboring gene SAGA complex/transcription factor TFIID complex subunit Taf9 Neighboring gene ncRNA Neighboring gene protein Mcp60 Neighboring gene ncRNA Neighboring gene RNA-binding protein Cip2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003424.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by PomBase

Function Evidence Code Pubs
enables rRNA 2'-O-ribose methylation guide activity ISO
Inferred from Sequence Orthology
more info
  
Process Evidence Code Pubs
involved_in snoRNA guided rRNA 2'-O-methylation ISO
Inferred from Sequence Orthology
more info
  
Component Evidence Code Pubs
part_of box C/D methylation guide snoRNP complex ISO
Inferred from Sequence Orthology
more info
  
is_active_in nucleolus ISO
Inferred from Sequence Orthology
more info
  

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003424.3 Reference assembly

    Range
    339548..339642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. NR_197136.1 RNA Sequence

    Status: PROVISIONAL

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.