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LOC9268388 putative disease resistance RPP13-like protein 1 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9268388, updated on 13-Jul-2024

Summary

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Gene symbol
LOC9268388
Gene description
putative disease resistance RPP13-like protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
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Genomic context

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See LOC9268388 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 6 NC_089040.1 (25836459..25840253, complement)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 6 NC_029261.1 (24974416..24978095, complement)

Chromosome 6 - NC_089040.1Genomic Context describing neighboring genes Neighboring gene disease resistance protein RGA2 Neighboring gene retrovirus-related Pol polyprotein from transposon TNT 1-94 Neighboring gene expansin-A16-like Neighboring gene uncharacterized LOC4341550

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ADP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response to other organism IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: putative disease resistance RPP13-like protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089040.1 Reference ASM3414082v1 Primary Assembly

    Range
    25836459..25840253 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_026025946.2 → XP_025881731.2  LOW QUALITY PROTEIN: putative disease resistance RPP13-like protein 1

Nucleotide Protein
Heading Accession and Version

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