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LOC9270043 transcription initiation factor TFIID subunit 8 [ Oryza sativa Japonica Group (Japanese rice) ]

Gene ID: 9270043, updated on 12-Jul-2024

Summary

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Gene symbol
LOC9270043
Gene description
transcription initiation factor TFIID subunit 8
Locus tag
OSNPB_020699900
Gene type
protein coding
RefSeq status
MODEL
Organism
Oryza sativa Japonica Group
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; Liliopsida; Poales; Poaceae; BOP clade; Oryzoideae; Oryzeae; Oryzinae; Oryza; Oryza sativa
Also known as
OJ1111_E07.4
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Genomic context

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Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_06 current ASM3414082v1 (GCF_034140825.1) 2 NC_089036.1 (29284189..29285366)
102 previous assembly IRGSP-1.0 (GCF_001433935.1) 2 NC_029257.1 (28794113..28795353)

Chromosome 2 - NC_089036.1Genomic Context describing neighboring genes Neighboring gene DNA topoisomerase 2 Neighboring gene uncharacterized LOC136355121 Neighboring gene wall-associated receptor kinase 17-like Neighboring gene uncharacterized protein At1g51745 Neighboring gene cell division cycle 20.2, cofactor of APC complex

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Rice Full-Length cDNA Consortium, et al. Science, 2003 Jul 18. PMID 12869764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIID complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription initiation factor TFIID subunit 8
Names
Os02g0699900
P0459B01.33

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_034140825.1-RS_2024_06

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ASM3414082v1 Primary Assembly

Genomic

  1. NC_089036.1 Reference ASM3414082v1 Primary Assembly

    Range
    29284189..29285366
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015770286.3 → XP_015625772.1  transcription initiation factor TFIID subunit 8

    UniProtKB/TrEMBL
    B8AH79, Q6Z8D5, Q6ZIL6
    Conserved Domains (1) summary
    cl22885
    Location:22 → 86
    TAF9; TATA Binding Protein (TBP) Associated Factor 9 (TAF9) is one of several TAFs that bind TBP and is involved in forming Transcription Factor IID (TFIID) complex
Nucleotide Protein
Heading Accession and Version

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