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MAYVgp1 nonstructural polyprotein nsP1-nsP2-nsP3-nsP4 [ Mayaro virus ]

Gene ID: 935140, updated on 18-Aug-2023

Summary

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Gene symbol
MAYVgp1
Gene description
nonstructural polyprotein nsP1-nsP2-nsP3-nsP4
Locus tag
MAYVgp1
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Mayaro virus
Lineage
Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage; Togaviridae; Alphavirus; SFV complex
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Genomic context

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Sequence:
NC_003417.1 (77..7390)

NC_003417.1Genomic Context describing neighboring genes Neighboring gene nonstructural polyprotein nsP1-nsP2-nsP3 Neighboring gene truncated polyprotein Neighboring gene structural polyprotein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003417.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Miscellaneous features

  • Loc: 5534-5554 nsP3-nsP4 junction

General protein information

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Preferred Names
nonstructural polyprotein nsP1-nsP2-nsP3-nsP4
Names
nonstructural protein nsP1
nonstructural protein nsP2
nonstructural protein nsP3
nonstructural protein nsP4
NP_579968.1
  • contains a leaky opal stop codon

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003417.1 Reference assembly

    Range
    77..7390
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_579968.1 nonstructural polyprotein nsP1-nsP2-nsP3-nsP4 [Mayaro virus]

    See identical proteins and their annotated locations for NP_579968.1

    Status: REVIEWED

    UniProtKB/Swiss-Prot
    Q8QHM4, Q8QZ73
    UniProtKB/TrEMBL
    A0A0P0GE52, A0A345BI14
    Conserved Domains (5) summary
    smart00506
    Location:1338 → 1459
    A1pp; Appr-1"-p processing enzyme
    pfam00978
    Location:1977 → 2425
    RdRP_2; RNA dependent RNA polymerase
    pfam01707
    Location:965 → 1165
    Peptidase_C9; Peptidase family C9
    pfam01443
    Location:720 → 952
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01660
    Location:16 → 380
    Vmethyltransf; Viral methyltransferase

  2. NP_740687.1 nonstructural protein nsP1

    Conserved Domains (1) summary
    pfam01660
    Location:16 → 380
    Vmethyltransf; Viral methyltransferase

  3. NP_740688.1 nonstructural protein nsP2

    Conserved Domains (3) summary
    pfam01443
    Location:184 → 416
    Viral_helicase1; Viral (Superfamily 1) RNA helicase
    pfam01707
    Location:429 → 629
    Peptidase_C9; Peptidase family C9
    cl21455
    Location:178 → 228
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases

  4. NP_740689.1 nonstructural protein nsP3

    Conserved Domains (1) summary
    smart00506
    Location:4 → 125
    A1pp; Appr-1"-p processing enzyme

  5. NP_740690.1 nonstructural protein nsP4

    UniProtKB/TrEMBL
    A0A0P0BSB5
    Conserved Domains (1) summary
    pfam00978
    Location:158 → 606
    RdRP_2; RNA dependent RNA polymerase
Nucleotide Protein
Heading Accession and Version

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