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V1 coat protein [ Tomato leaf curl Karnataka virus ]

Gene ID: 944508, updated on 18-Aug-2023

Summary

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Gene symbol
V1
Gene description
coat protein
Locus tag
ToLCKVgp2
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Tomato leaf curl Karnataka virus (strain: Bangalore II, India, isolate: isolate 2)
Lineage
Viruses; ssDNA viruses; Geminiviridae; Begomovirus
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Genomic context

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Location:
clone: recombinant plasmid pIND9 (infectious clone)
Sequence:
NC_003897.1 (304..1074)

NC_003897.1Genomic Context describing neighboring genes Neighboring gene precoat protein Neighboring gene C3 protein Neighboring gene C2 protein Neighboring gene replication-associated protein Neighboring gene C4 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003897.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coat protein
NP_632009.1
  • cp; protein for encapsidation of viral DNA

VOG classification

Description:

  • VOGs0101 [S] Coat protein
  • Structural Proteins

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003897.1 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_632009.1 coat protein [Tomato leaf curl Karnataka virus]

    See identical proteins and their annotated locations for NP_632009.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q88552, V5N3I7
    Conserved Domains (1) summary
    pfam00844
    Location:18 → 256
    Gemini_coat; Geminivirus coat protein/nuclear export factor BR1 family
Nucleotide Protein
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