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env env protein [ Simian immunodeficiency virus SIV-mnd 2 ]

Gene ID: 956110, updated on 15-Aug-2018

Summary

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Gene symbol
env
Gene description
env protein
Locus tag
Siv2gp7
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Simian immunodeficiency virus SIV-mnd 2 (isolate: SIVmnd-2, nat-host: Mandrillus sphinx)
Lineage
Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae; Lentivirus; Primate lentivirus group
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Genomic context

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Sequence:
NC_004455.1 (6309..8909)

NC_004455.1Genomic Context describing neighboring genes Neighboring gene vif protein Neighboring gene vpx protein Neighboring gene vpr protein Neighboring gene tat protein Neighboring gene nef protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_004455.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Simian immunodeficiency virus from the sooty mangabey and rhesus macaque is modified with O-linked carbohydrate. Stansell E, et al. J Virol, 2011 Jan. PMID 20962077, Free PMC Article
  2. A peptide-loaded dendritic cell based cytotoxic T-lymphocyte (CTL) vaccination strategy using peptides that span SIV Tat, Rev, and Env overlapping reading frames. Klase Z, et al. Retrovirology, 2006 Jan 6. PMID 16398928, Free PMC Article
  3. Natural infection of wild-born mandrills (Mandrillus sphinx) with two different types of simian immunodeficiency virus. Takehisa J, et al. AIDS Res Hum Retroviruses, 2001 Aug 10. PMID 11522184

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. These data demonstrate the presence of non- and monosialylated core 1 O-linked carbohydrate on the gp120s of SIVmac and SIVsm
    Title: Simian immunodeficiency virus from the sooty mangabey and rhesus macaque is modified with O-linked carbohydrate.
  2. Autologous dendritic cells, loaded with SIV peptides from Tat, Rev, and Env, induced a distinct cellular immune response measurable ex vivo but4 not in vivo.
    Title: A peptide-loaded dendritic cell based cytotoxic T-lymphocyte (CTL) vaccination strategy using peptides that span SIV Tat, Rev, and Env overlapping reading frames.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
env protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_004455.1 Reference assembly

    Range
    6309..8909
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_758892.1 env protein [Simian immunodeficiency virus SIV-mnd 2]

    See identical proteins and their annotated locations for NP_758892.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    Q8AII4
    Conserved Domains (2) summary
    pfam00516
    Location:18 → 534
    GP120; Envelope glycoprotein GP120
    cl02885
    Location:561 → 681
    Ebola_HIV-1-like_HR1-HR2; heptad repeat 1-heptad repeat 2 region (ectodomain) of the transmembrane subunit of various endogenous retroviruses (ERVs) and infectious retroviruses, including Ebola virus and human immunodeficiency virus type 1 (HIV-1)
Nucleotide Protein
Heading Accession and Version

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