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pol RNA-dependent RNA polymerase [ Pseudomonas phage phi8 ]

Gene ID: 956601, updated on 15-Aug-2018

Summary

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Gene symbol
pol
Gene description
RNA-dependent RNA polymerase
Locus tag
phi-8Lp3
Gene type
protein coding
RefSeq status
REVIEWED
Organism
Pseudomonas phage phi8 (nat-host: Pseudomonas syringae)
Lineage
Viruses; dsRNA viruses; Cystoviridae
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Genomic context

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Location:
segment: L
Sequence:
NC_003299.1 (1211..3121)

NC_003299.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene PHa Neighboring gene PHb Neighboring gene packaging NTPase P4 Neighboring gene major structural protein of viral core Neighboring gene core protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_003299.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of phi8, a bacteriophage containing three double-stranded RNA genomic segments and distantly related to Phi6. Hoogstraten D, et al. Virology, 2000 Jun 20. PMID 10873764

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
RNA-dependent RNA polymerase
NP_524561.1
  • Carries out transcription and genome replication inside a large icosahedral complex formed with 4 other viral proteins (inner core). However, purified P2 protein is active. Accepts single and double-stranded RNA as templates and is capable of de novo initiation. Structurally related to Hepatitis C virus RdRP. other names: P2.

VOG classification

Description:

  • VOGp0497 [T] RNA-dependent RNA polymerase
  • RNA Replication, Transcription and Modification

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_003299.1 Reference assembly

    Range
    1211..3121
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_524561.1 RNA polymerase [Pseudomonas phage phi8]

    See identical proteins and their annotated locations for NP_524561.1

    Status: REVIEWED

    UniProtKB/TrEMBL
    Q9MC15
    Conserved Domains (1) summary
    PHA00497
    Location:1 → 632
    pol; RNA-dependent RNA polymerase
Nucleotide Protein
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Gene LinkOut

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