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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
Genomic
-
NG_027954.2 RefSeqGene
- Range
-
5002..153701
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
NM_001199207.2 → NP_001186136.1 general transcription factor II-I repeat domain-containing protein 1 isoform 3
See identical proteins and their annotated locations for NP_001186136.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (3) represents the longest transcript and encodes the longest isoform (3).
- Source sequence(s)
-
AF151354, AY648295
- Consensus CDS
-
CCDS56492.1
- UniProtKB/TrEMBL
-
Q59FS0
- Related
- ENSP00000397566.2, ENST00000455841.6
- Conserved Domains (1) summary
-
- pfam02946
Location:597 → 669
- GTF2I; GTF2I-like repeat
-
NM_001410888.1 → NP_001397817.1 general transcription factor II-I repeat domain-containing protein 1 isoform 4
Status: REVIEWED
- Source sequence(s)
-
AC004851, AC005015, AC211433
- Consensus CDS
-
CCDS94121.1
- UniProtKB/TrEMBL
-
E9PFE2
- Related
- ENSP00000418383.1, ENST00000476977.5
-
NM_005685.4 → NP_005676.3 general transcription factor II-I repeat domain-containing protein 1 isoform 2
See identical proteins and their annotated locations for NP_005676.3
Status: REVIEWED
- Description
- Transcript Variant: This variant (2) uses an alternate splice site in the coding region, compared to variant 3. The encoded isoform (2) is shorter compared to isoform 3.
- Source sequence(s)
-
AF118270, AF151354, AF156489, AY648295
- Consensus CDS
-
CCDS47613.1
- UniProtKB/TrEMBL
-
Q59FS0
- Related
- ENSP00000408477.2, ENST00000424337.7
- Conserved Domains (1) summary
-
- pfam02946
Location:565 → 637
- GTF2I; GTF2I-like repeat
-
NM_016328.3 → NP_057412.1 general transcription factor II-I repeat domain-containing protein 1 isoform 1
See identical proteins and their annotated locations for NP_057412.1
Status: REVIEWED
- Description
- Transcript Variant: This variant (1) uses alternate splice sites in the coding region, compared to variant 3. The encoded isoform (1) is shorter compared to isoform 3.
- Source sequence(s)
-
AF151354, AY648295, BC018136
- Consensus CDS
-
CCDS5571.1
- UniProtKB/Swiss-Prot
- O95444, Q6DSU6, Q75MX7, Q86UM3, Q8WVC4, Q9UHK8, Q9UHL9, Q9UI91
- UniProtKB/TrEMBL
-
Q59FS0
- Related
- ENSP00000265755.3, ENST00000265755.7
- Conserved Domains (1) summary
-
- pfam02946
Location:565 → 637
- GTF2I; GTF2I-like repeat
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000007.14 Reference GRCh38.p14 Primary Assembly
- Range
-
74453906..74602605
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_047421058.1 → XP_047277014.1 general transcription factor II-I repeat domain-containing protein 1 isoform X3
-
XM_047421064.1 → XP_047277020.1 general transcription factor II-I repeat domain-containing protein 1 isoform X8
-
XM_011516713.2 → XP_011515015.1 general transcription factor II-I repeat domain-containing protein 1 isoform X11
- UniProtKB/TrEMBL
-
Q59FS0
- Conserved Domains (1) summary
-
- pfam02946
Location:565 → 637
- GTF2I; GTF2I-like repeat
-
XM_047421056.1 → XP_047277012.1 general transcription factor II-I repeat domain-containing protein 1 isoform X1
-
XM_047421057.1 → XP_047277013.1 general transcription factor II-I repeat domain-containing protein 1 isoform X2
-
XM_047421061.1 → XP_047277017.1 general transcription factor II-I repeat domain-containing protein 1 isoform X5
-
XM_017012802.2 → XP_016868291.1 general transcription factor II-I repeat domain-containing protein 1 isoform X4
- UniProtKB/TrEMBL
-
Q59FS0
- Conserved Domains (1) summary
-
- pfam02946
Location:565 → 637
- GTF2I; GTF2I-like repeat
-
XM_006716182.4 → XP_006716245.1 general transcription factor II-I repeat domain-containing protein 1 isoform X6
See identical proteins and their annotated locations for XP_006716245.1
- UniProtKB/TrEMBL
- E9PFE2, Q59FS0
- Conserved Domains (1) summary
-
- pfam02946
Location:565 → 637
- GTF2I; GTF2I-like repeat
-
XM_017012805.2 → XP_016868294.1 general transcription factor II-I repeat domain-containing protein 1 isoform X10
- UniProtKB/TrEMBL
-
Q59FS0
-
XM_047421059.1 → XP_047277015.1 general transcription factor II-I repeat domain-containing protein 1 isoform X3
-
XM_047421062.1 → XP_047277018.1 general transcription factor II-I repeat domain-containing protein 1 isoform X7
- UniProtKB/Swiss-Prot
- O95444, Q6DSU6, Q75MX7, Q86UM3, Q8WVC4, Q9UHK8, Q9UHL9, Q9UI91
-
XM_017012804.2 → XP_016868293.1 general transcription factor II-I repeat domain-containing protein 1 isoform X9
- UniProtKB/TrEMBL
-
Q59FS0
- Conserved Domains (1) summary
-
- pfam02946
Location:565 → 637
- GTF2I; GTF2I-like repeat
-
XM_047421060.1 → XP_047277016.1 general transcription factor II-I repeat domain-containing protein 1 isoform X4
-
XM_047421066.1 → XP_047277022.1 general transcription factor II-I repeat domain-containing protein 1 isoform X10
-
XM_047421063.1 → XP_047277019.1 general transcription factor II-I repeat domain-containing protein 1 isoform X7
- UniProtKB/Swiss-Prot
- O95444, Q6DSU6, Q75MX7, Q86UM3, Q8WVC4, Q9UHK8, Q9UHL9, Q9UI91
-
XM_047421065.1 → XP_047277021.1 general transcription factor II-I repeat domain-containing protein 1 isoform X9
Alternate T2T-CHM13v2.0
Genomic
-
NC_060931.1 Alternate T2T-CHM13v2.0
- Range
-
75656184..75805371
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054359379.1 → XP_054215354.1 general transcription factor II-I repeat domain-containing protein 1 isoform X1
-
XM_054359385.1 → XP_054215360.1 general transcription factor II-I repeat domain-containing protein 1 isoform X5
-
XM_054359380.1 → XP_054215355.1 general transcription factor II-I repeat domain-containing protein 1 isoform X2
-
XM_054359392.1 → XP_054215367.1 general transcription factor II-I repeat domain-containing protein 1 isoform X10
-
XM_054359383.1 → XP_054215358.1 general transcription factor II-I repeat domain-containing protein 1 isoform X4
-
XM_054359386.1 → XP_054215361.1 general transcription factor II-I repeat domain-containing protein 1 isoform X6
- UniProtKB/TrEMBL
-
E9PFE2
-
XM_054359381.1 → XP_054215356.1 general transcription factor II-I repeat domain-containing protein 1 isoform X3
-
XM_054359389.1 → XP_054215364.1 general transcription factor II-I repeat domain-containing protein 1 isoform X8
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XM_054359394.1 → XP_054215369.1 general transcription factor II-I repeat domain-containing protein 1 isoform X11
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XM_054359390.1 → XP_054215365.1 general transcription factor II-I repeat domain-containing protein 1 isoform X9
-
XM_054359387.1 → XP_054215362.1 general transcription factor II-I repeat domain-containing protein 1 isoform X7
- UniProtKB/Swiss-Prot
- O95444, Q6DSU6, Q75MX7, Q86UM3, Q8WVC4, Q9UHK8, Q9UHL9, Q9UI91
-
XM_054359393.1 → XP_054215368.1 general transcription factor II-I repeat domain-containing protein 1 isoform X10
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XM_054359384.1 → XP_054215359.1 general transcription factor II-I repeat domain-containing protein 1 isoform X4
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XM_054359382.1 → XP_054215357.1 general transcription factor II-I repeat domain-containing protein 1 isoform X3
-
XM_054359388.1 → XP_054215363.1 general transcription factor II-I repeat domain-containing protein 1 isoform X7
- UniProtKB/Swiss-Prot
- O95444, Q6DSU6, Q75MX7, Q86UM3, Q8WVC4, Q9UHK8, Q9UHL9, Q9UI91
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XM_054359391.1 → XP_054215366.1 general transcription factor II-I repeat domain-containing protein 1 isoform X9