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    LOC100131124 adaptor related protein complex 4 subunit sigma 1 pseudogene [ Homo sapiens (human) ]

    Gene ID: 100131124, updated on 17-Sep-2024

    Summary

    Gene symbol
    LOC100131124
    Gene description
    adaptor related protein complex 4 subunit sigma 1 pseudogene
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

    See LOC100131124 in Genome Data Viewer
    Location:
    6q15
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (89059428..89059922)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (90268093..90268587)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (89769147..89769641)

    Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene RNA guanylyltransferase and 5'-phosphatase Neighboring gene uncharacterized LOC124901521 Neighboring gene MPRA-validated peak5946 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24816 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:89438317-89438876 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:89439995-89440553 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:89440554-89441112 Neighboring gene MPRA-validated peak5947 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:89536615-89537462 Neighboring gene MPRA-validated peak5948 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr6:89671756-89672682 Neighboring gene ReSE screen-validated silencer GRCh37_chr6:89673400-89673634 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24817 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:89682583-89683204 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr6:89731277-89731892 Neighboring gene CYCS pseudogene 16 Neighboring gene CRISPRi-validated cis-regulatory element chr6.3824 Neighboring gene MPRA-validated peak5950 silencer Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr6:89767403-89767931 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24818 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17382 Neighboring gene RNA, U2 small nuclear 61, pseudogene Neighboring gene PNRC1 divergent transcript

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • adaptor related protein complex 4 sigma 1 subunit pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_030189.2 

      Range
      1..495
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

      Range
      89059428..89059922
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060930.1 Alternate T2T-CHM13v2.0

      Range
      90268093..90268587
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)