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    Vcp-rs valosin containing protein, related sequence [ Mus musculus (house mouse) ]

    Gene ID: 236937, updated on 17-Aug-2024

    Summary

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    Official Symbol
    Vcp-rsprovided by MGI
    Official Full Name
    valosin containing protein, related sequenceprovided by MGI
    Primary source
    MGI:MGI:894298
    See related
    AllianceGenome:MGI:894298
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Vcp-ps; EG236937
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    Genomic context

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    See Vcp-rs in Genome Data Viewer
    Location:
    X D; X 46.62 cM
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) X NC_000086.8 (103388874..103392111, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) X NC_000086.7 (104345268..104348505, complement)

    Chromosome X - NC_000086.8Genomic Context describing neighboring genes Neighboring gene predicted gene, 22266 Neighboring gene neurite extension and migration factor Neighboring gene microRNA 672 Neighboring gene STARR-seq mESC enhancer starr_47705 Neighboring gene STARR-seq mESC enhancer starr_47706 Neighboring gene STARR-seq mESC enhancer starr_47707 Neighboring gene STARR-seq mESC enhancer starr_47708 Neighboring gene STARR-seq mESC enhancer starr_47709 Neighboring gene ATP-binding cassette, sub-family B member 7 Neighboring gene STARR-seq mESC enhancer starr_47712 Neighboring gene 39S ribosomal protein L30, mitochondrial pseudogene Neighboring gene uracil phosphoribosyltransferase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The mouse p97 (CDC48) gene. Genomic structure, definition of transcriptional regulatory sequences, gene expression, and characterization of a pseudogene. Müller JM, et al. J Biol Chem, 1999 Apr 9. PMID 10187799
    2. Mapping the valosin-containing protein (VCP) gene on human chromosome 9 and mouse chromosome 4, and a likely pseudogene on the mouse X chromosome. Hoyle J, et al. Mamm Genome, 1997 Oct. PMID 9321476

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Other Names

    • p97 ATPase pseudogene
    • valosin containing protein pseudogene

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002295.4 

      Range
      101..3338
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000086.8 Reference GRCm39 C57BL/6J

      Range
      103388874..103392111 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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