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    IL6RP1 interleukin 6 receptor pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 157916, updated on 17-Sep-2024

    Summary

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    Official Symbol
    IL6RP1provided by HGNC
    Official Full Name
    interleukin 6 receptor pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:6020
    See related
    Ensembl:ENSG00000234910 AllianceGenome:HGNC:6020
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    IL6RL1
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    Genomic context

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    See IL6RP1 in Genome Data Viewer
    Location:
    9q22.2
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 9 NC_000009.12 (90081270..90082686, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 9 NC_060933.1 (102246371..102247787, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 9 NC_000009.11 (92843552..92844968, complement)

    Chromosome 9 - NC_000009.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28562 Neighboring gene uncharacterized LOC101927847 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28563 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28564 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28565 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28566 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:92776129-92777328 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_108919 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28567 Neighboring gene MIR4290 host gene Neighboring gene NANOG hESC enhancer GRCh37_chr9:92796466-92797003 Neighboring gene microRNA 4290 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr9:92822514-92823713 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr9:92824519-92825718 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28568 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_108944 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 28569 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20019 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr9:92912157-92912789 Neighboring gene uncharacterized LOC105376142 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20020 Neighboring gene olfactory receptor family 7 subfamily E member 31 pseudogene

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cloning and chromosomal localization of a pseudogene corresponding to a mRNA for a soluble IL-6 receptor. Snyers L, et al. DNA Seq, 1995. PMID 7579586
    2. The Interleukin-6-dependent DNA-binding protein gene (transcription factor 5: TCF5) maps to human chromosome 20 and rat chromosome 3, the IL6 receptor locus (IL6R) to human chromosome 1 and rat chromosome 2, and the rat IL6 gene to rat chromosome 4. Szpirer J, et al. Genomics, 1991 Jul. PMID 1889804

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Other Names

    • interleukin 6 receptor-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002785.4 

      Range
      101..1517
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000009.12 Reference GRCh38.p14 Primary Assembly

      Range
      90081270..90082686 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060933.1 Alternate T2T-CHM13v2.0

      Range
      102246371..102247787 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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