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    LOC100422497 UTP18, small subunit (SSU) processome component, homolog (yeast) pseudogene [ Homo sapiens (human) ]

    Gene ID: 100422497, updated on 17-Jun-2024

    Summary

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    Gene symbol
    LOC100422497
    Gene description
    UTP18, small subunit (SSU) processome component, homolog (yeast) pseudogene
    See related
    Ensembl:ENSG00000267293
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC100422497 in Genome Data Viewer
    Location:
    18q21.1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 18 NC_000018.10 (46028192..46029832)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 18 NC_060942.1 (46219158..46220796)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 18 NC_000018.9 (43608158..43609798)

    Chromosome 18 - NC_000018.10Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13263 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:43408730-43409428 Neighboring gene ectopic P-granules 5 autophagy tethering factor Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr18:43418307-43418808 Neighboring gene sialic acid binding Ig like lectin 15 Neighboring gene Sharpr-MPRA regulatory region 10800 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr18:43478156-43479355 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr18:43530707-43531906 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:43547054-43547555 Neighboring gene H3K27ac hESC enhancer GRCh37_chr18:43557301-43557872 Neighboring gene proline-serine-threonine phosphatase interacting protein 2 Neighboring gene RN7SK pseudogene 26 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13264 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13265 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13266 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13267 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 13268 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 9416 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr18:43652131-43652632 Neighboring gene tRNA-Lys (CTT) 6-1 Neighboring gene RNY4 pseudogene 37 Neighboring gene ATP synthase F1 subunit alpha

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_026326.2 

      Range
      101..1741
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000018.10 Reference GRCh38.p14 Primary Assembly

      Range
      46028192..46029832
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060942.1 Alternate T2T-CHM13v2.0

      Range
      46219158..46220796
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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