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    LOC100271842 phosphatidylinositol 4-kinase type 2 beta pseudogene [ Homo sapiens (human) ]

    Gene ID: 100271842, updated on 10-Dec-2024

    Summary

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    Gene symbol
    LOC100271842
    Gene description
    phosphatidylinositol 4-kinase type 2 beta pseudogene
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See LOC100271842 in Genome Data Viewer
    Location:
    1q42.13
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (227278445..227279523)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (226466797..226467875)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (227466146..227467224)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene CDC42 binding protein kinase alpha Neighboring gene cathepsin B pseudogene Neighboring gene UBA5 pseudogene 1 Neighboring gene uncharacterized LOC124904531 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:227543671-227544356 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr1:227544357-227545040 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:227576538-227577298 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:227583939-227585138 Neighboring gene long intergenic non-protein coding RNA 1641 Neighboring gene nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_011419.2 

      Range
      101..1179
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      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      227278445..227279523
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      226466797..226467875
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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