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    AKR1D1P1 aldo-keto reductase family 1 member D1 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 80701, updated on 17-Jun-2024

    Summary

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    Official Symbol
    AKR1D1P1provided by HGNC
    Official Full Name
    aldo-keto reductase family 1 member D1 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:11288
    See related
    AllianceGenome:HGNC:11288
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    AKR1D1P; SRD5BP1
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    Genomic context

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    See AKR1D1P1 in Genome Data Viewer
    Location:
    1q24.2
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (167519548..167536087)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (166870999..166887541)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (167488785..167505324)

    Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124900412 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2037 Neighboring gene POU class 2 homeobox 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2038 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:167269998-167270202 Neighboring gene VISTA enhancer hs1331 Neighboring gene MPRA-validated peak441 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:167393486-167394456 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:167394457-167395427 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr1:167399000-167399906 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:167399907-167400813 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1524 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1525 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1526 Neighboring gene uncharacterized LOC101928512 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1527 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1528 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1529 Neighboring gene CD247 molecule Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:167455187-167455767 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:167472740-167473240 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr1:167486398-167487597 Neighboring gene uncharacterized LOC107985224 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:167509239-167509739 Neighboring gene GATA motif-containing MPRA enhancer 235 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1530 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:167533326-167534525 Neighboring gene cellular repressor of E1A stimulated genes 1 Neighboring gene ribosomal protein S18 pseudogene 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genomic organization of a human 5beta-reductase and its pseudogene and substrate selectivity of the expressed enzyme. Charbonneau A, et al. Biochim Biophys Acta, 2001 Jan 26. PMID 11342103
    2. Assignment of steroid 5beta-reductase (SRD5B1) and its pseudogene (SRD5BP1) to human chromosome bands 7q32-->q33 and 1q23-->q25, respectively, by in situ hybridization. Charbonneau A, et al. Cytogenet Cell Genet, 1999. PMID 10343119

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • aldo-keto reductase family 1, member D1 (delta 4-3-ketosteroid-5-beta-reductase) pseudogene
    • steroid-5-beta-reductase, beta polypeptide pseudogene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002683.4 

      Range
      101..16640
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

      Range
      167519548..167536087
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060925.1 Alternate T2T-CHM13v2.0

      Range
      166870999..166887541
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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