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    ZNF646P1 zinc finger protein 646 pseudogene 1 [ Homo sapiens (human) ]

    Gene ID: 100419854, updated on 10-Dec-2024

    Summary

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    Official Symbol
    ZNF646P1provided by HGNC
    Official Full Name
    zinc finger protein 646 pseudogene 1provided by HGNC
    Primary source
    HGNC:HGNC:39749
    See related
    AllianceGenome:HGNC:39749
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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    Genomic context

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    See ZNF646P1 in Genome Data Viewer
    Location:
    13q14.3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (53408566..53409878, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (52624169..52625481, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (53982701..53984013, complement)

    Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:53776063-53776780 Neighboring gene protocadherin 8 pseudogene 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr13:53850183-53851155 Neighboring gene RNA, 7SL, cytoplasmic 618, pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr13:53917362-53918024 Neighboring gene NANOG hESC enhancer GRCh37_chr13:53985519-53986047 Neighboring gene uncharacterized LOC105370210 Neighboring gene Sharpr-MPRA regulatory region 6127 Neighboring gene long intergenic non-protein coding RNA 558

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_024858.2 

      Range
      101..1413
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

      Range
      53408566..53409878 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060937.1 Alternate T2T-CHM13v2.0

      Range
      52624169..52625481 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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