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    LOC107985508 uncharacterized LOC107985508 [ Homo sapiens (human) ]

    Gene ID: 107985508, updated on 17-Jun-2024

    Summary

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    Gene symbol
    LOC107985508
    Gene description
    uncharacterized LOC107985508
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

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    See LOC107985508 in Genome Data Viewer
    Location:
    21q21.1
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 21 NC_000021.9 (22209920..22403096)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 21 NC_060945.1 (20577815..20759831)

    Chromosome 21 - NC_000021.9Genomic Context describing neighboring genes Neighboring gene phosphoglycerate kinase 1 pseudogene Neighboring gene MED14-independent group 3 enhancer GRCh37_chr21:23561834-23563033 Neighboring gene RNA, U4 small nuclear 45, pseudogene Neighboring gene mitogen-activated protein kinase 6 pseudogene 2 Neighboring gene MPRA-validated peak4381 silencer Neighboring gene uncharacterized LOC107985494

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: HPA RNA-seq normal tissues
    • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
    • BioProject: PRJEB4337
    • Publication: PMID 24309898
    • Analysis date: Wed Apr 4 07:08:55 2018

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    Genotypes

    NCBI Reference Sequences (RefSeq)

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    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000021.9 Reference GRCh38.p14 Primary Assembly

      Range
      22209920..22403096
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007067937.1 RNA Sequence

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060945.1 Alternate T2T-CHM13v2.0

      Range
      20577815..20759831
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_007090079.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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