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    D1T40_gp1 hypothetical protein [ Feline sarcoma virus (STRAIN HARDY-ZUCKERMAN 4) ]

    Gene ID: 37619592, updated on 18-Aug-2023

    Summary

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    Gene symbol
    D1T40_gp1
    Gene description
    hypothetical protein
    Locus tag
    D1T40_gp1
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Feline sarcoma virus (STRAIN HARDY-ZUCKERMAN 4)
    Lineage
    Viruses; Retro-transcribing viruses; Retroviridae; Orthoretrovirinae; Gammaretrovirus
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    Genomic context

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    Sequence:
    NC_038923.1 (1..2373)

    NC_038923.1Genomic Context describing neighboring genes

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_038923.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A new acute transforming feline retrovirus and relationship of its oncogene v-kit with the protein kinase gene family. Besmer P, et al. Nature, 1986 Apr 3-9. PMID 3007997

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    General protein information

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    Preferred Names
    hypothetical protein
    Names
    gag p15 protein (127 aa)
    gag p12 protein (70 aa)
    pol protein (6 aa)
    gag p30 protein (143 aa) (1241 is 2nd base in codon)
    v-kit protein (370 aa) (1242 is 3rd base in codon)
    YP_009508243.1
    • gag-kit protein (790 aa)

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_038923.1 Reference assembly

      Range
      1..2373
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. YP_009508243.1 unnamed protein product [Feline sarcoma virus (STRAIN HARDY-ZUCKERMAN 4)]

      Status: PROVISIONAL

      Conserved Domains (4) summary
      pfam01141
      Location:222 → 268
      Gag_p12; Gag polyprotein, inner coat protein p12
      pfam01140
      Location:76 → 172
      Gag_MA; Matrix protein (MA), p15
      pfam02093
      Location:282 → 415
      Gag_p30; Gag P30 core shell protein
      cl21453
      Location:412 → 779
      PKc_like; Protein Kinases, catalytic domain

    2. YP_009509091.1 gag p15 protein (127 aa)

      Conserved Domains (1) summary
      pfam01140
      Location:2 → 98
      Gag_MA; Matrix protein (MA), p15

    3. YP_009509092.1 gag p12 protein (70 aa)

    4. YP_009509093.1 pol protein (6 aa)

    5. YP_009509094.1 gag p30 protein (143 aa) (1241 is 2nd base in codon)

      Conserved Domains (1) summary
      pfam02093
      Location:11 → 143
      Gag_p30; Gag P30 core shell protein

    6. YP_009509095.1 v-kit protein (370 aa) (1242 is 3rd base in codon)

      UniProtKB/Swiss-Prot
      P04048
      Conserved Domains (1) summary
      cl21453
      Location:1 → 366
      PKc_like; Protein Kinases, catalytic domain
    Nucleotide Protein
    Heading Accession and Version

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