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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001253846.2 → NP_001240775.1 GDP-mannose 4,6 dehydratase isoform 2
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, lacks a portion of the 5' coding region and initiates translation at an alternate start codon, compared to variant 1. The encoded isoform (2) is shorter and has a distinct N-terminus, compared to isoform 1.
- Source sequence(s)
-
AF040260
- Consensus CDS
-
CCDS58994.1
- UniProtKB/TrEMBL
-
B2R9X3
- Related
- ENSP00000436726.1, ENST00000530927.5
- Conserved Domains (2) summary
-
- TIGR01472
Location:5 → 336
- gmd; GDP-mannose 4,6-dehydratase
- pfam16363
Location:4 → 328
- GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
-
NM_001500.4 → NP_001491.1 GDP-mannose 4,6 dehydratase isoform 1
See identical proteins and their annotated locations for NP_001491.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
- Source sequence(s)
-
AF042377, BM665440, BQ923510
- Consensus CDS
-
CCDS4474.1
- UniProtKB/Swiss-Prot
- E9PI88, O60547, O75357, Q5T954, Q6FH09, Q9UGZ3, Q9UJK9
- UniProtKB/TrEMBL
-
B2R9X3
- Related
- ENSP00000370194.4, ENST00000380815.5
- Conserved Domains (1) summary
-
- TIGR01472
Location:24 → 366
- gmd; GDP-mannose 4,6-dehydratase
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCh38.p14 Primary Assembly
Genomic
-
NC_000006.12 Reference GRCh38.p14 Primary Assembly
- Range
-
1623806..2245605 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_011514500.2 → XP_011512802.1 GDP-mannose 4,6 dehydratase isoform X1
- UniProtKB/TrEMBL
-
B2R9X3
- Conserved Domains (2) summary
-
- TIGR01472
Location:4 → 336
- gmd; GDP-mannose 4,6-dehydratase
- pfam16363
Location:5 → 328
- GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
-
XM_017010752.2 → XP_016866241.1 GDP-mannose 4,6 dehydratase isoform X4
-
XM_011514502.4 → XP_011512804.1 GDP-mannose 4,6 dehydratase isoform X3
- UniProtKB/TrEMBL
-
B2R9X3
- Conserved Domains (2) summary
-
- pfam16363
Location:27 → 329
- GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
- cl21454
Location:24 → 329
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_047418655.1 → XP_047274611.1 GDP-mannose 4,6 dehydratase isoform X2
- UniProtKB/TrEMBL
-
B2R9X3
-
XM_011514507.3 → XP_011512809.1 GDP-mannose 4,6 dehydratase isoform X8
- Conserved Domains (2) summary
-
- pfam16363
Location:27 → 216
- GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
- cl21454
Location:24 → 215
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_006715066.4 → XP_006715129.1 GDP-mannose 4,6 dehydratase isoform X9
- Conserved Domains (2) summary
-
- pfam01370
Location:26 → 257
- Epimerase; NAD dependent epimerase/dehydratase family
- cl21454
Location:24 → 257
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_011514506.3 → XP_011512808.1 GDP-mannose 4,6 dehydratase isoform X7
- Conserved Domains (2) summary
-
- pfam16363
Location:27 → 217
- GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
- cl21454
Location:24 → 214
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_011514505.3 → XP_011512807.1 GDP-mannose 4,6 dehydratase isoform X6
- Conserved Domains (2) summary
-
- pfam16363
Location:27 → 217
- GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
- cl21454
Location:24 → 214
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
-
XM_011514503.4 → XP_011512805.1 GDP-mannose 4,6 dehydratase isoform X5
- Conserved Domains (2) summary
-
- pfam16363
Location:27 → 217
- GDP_Man_Dehyd; GDP-mannose 4,6 dehydratase
- cl21454
Location:24 → 214
- NADB_Rossmann; Rossmann-fold NAD(P)(+)-binding proteins
RNA
-
XR_007059239.1 RNA Sequence
Alternate T2T-CHM13v2.0
Genomic
-
NC_060930.1 Alternate T2T-CHM13v2.0
- Range
-
1486810..2109239 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_054355189.1 → XP_054211164.1 GDP-mannose 4,6 dehydratase isoform X1
- UniProtKB/TrEMBL
-
B2R9X3
-
XM_054355192.1 → XP_054211167.1 GDP-mannose 4,6 dehydratase isoform X4
-
XM_054355191.1 → XP_054211166.1 GDP-mannose 4,6 dehydratase isoform X3
- UniProtKB/TrEMBL
-
B2R9X3
-
XM_054355190.1 → XP_054211165.1 GDP-mannose 4,6 dehydratase isoform X2
- UniProtKB/TrEMBL
-
B2R9X3
-
XM_054355196.1 → XP_054211171.1 GDP-mannose 4,6 dehydratase isoform X8
-
XM_054355193.1 → XP_054211168.1 GDP-mannose 4,6 dehydratase isoform X5
-
XM_054355195.1 → XP_054211170.1 GDP-mannose 4,6 dehydratase isoform X7
-
XM_054355194.1 → XP_054211169.1 GDP-mannose 4,6 dehydratase isoform X6
RNA
-
XR_008487300.1 RNA Sequence