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    CASC23 cancer susceptibility 23 [ Homo sapiens (human) ]

    Gene ID: 103581031, updated on 10-Dec-2024

    Summary

    Official Symbol
    CASC23provided by HGNC
    Official Full Name
    cancer susceptibility 23provided by HGNC
    Primary source
    HGNC:HGNC:50865
    See related
    Ensembl:ENSG00000255420 AllianceGenome:HGNC:50865
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC01464
    Expression
    Restricted expression toward testis (RPKM 3.3) See more
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    Genomic context

    See CASC23 in Genome Data Viewer
    Location:
    11p15.4
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 11 NC_000011.10 (8011278..8016509, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 11 NC_060935.1 (8090450..8095681, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 11 NC_000011.9 (8032825..8038056, complement)

    Chromosome 11 - NC_000011.10Genomic Context describing neighboring genes Neighboring gene cytochrome c oxidase subunit 6C pseudogene 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:8008582-8009121 Neighboring gene H3K27ac hESC enhancer GRCh37_chr11:8009122-8009660 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr11:8016231-8017430 Neighboring gene eukaryotic translation initiation factor 3 subunit F Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 3112 Neighboring gene TUB bipartite transcription factor Neighboring gene uncharacterized LOC124902627 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr11:8057222-8057786 Neighboring gene TUB antisense RNA 1

    Genomic regions, transcripts, and products

    General gene information

    Other Names

    • cancer susceptibility 23 (non-protein coding)
    • cancer susceptibility candidate 23 (non-protein coding)
    • long intergenic non-protein coding RNA 1464

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_125366.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC116456
      Related
      ENST00000534076.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000011.10 Reference GRCh38.p14 Primary Assembly

      Range
      8011278..8016509 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060935.1 Alternate T2T-CHM13v2.0

      Range
      8090450..8095681 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)