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    KRT19P2 keratin 19 pseudogene 2 [ Homo sapiens (human) ]

    Gene ID: 160313, updated on 17-Jun-2024

    Summary

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    Official Symbol
    KRT19P2provided by HGNC
    Official Full Name
    keratin 19 pseudogene 2provided by HGNC
    Primary source
    HGNC:HGNC:33423
    See related
    Ensembl:ENSG00000293230 AllianceGenome:HGNC:33423
    Gene type
    pseudo
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    KRT19P5
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    Genomic context

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    See KRT19P2 in Genome Data Viewer
    Location:
    12q22
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (94834454..94835028)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (94815326..94815900)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (95228230..95228804)

    Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene transmembrane and coiled-coil domain family 3 Neighboring gene uncharacterized LOC105369914 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4728 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:95043785-95044500 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6791 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6792 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6793 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6794 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6795 Neighboring gene uncharacterized LOC124902989 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6796 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4731 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6797 Neighboring gene NANOG hESC enhancer GRCh37_chr12:95164297-95164856 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr12:95209587-95210226 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6799 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6802 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6801 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6800 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:95227575-95228076 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:95228077-95228576 Neighboring gene microRNA 492 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6803 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4732 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4733 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4734 Neighboring gene uncharacterized LOC105369915 Neighboring gene NANOG hESC enhancer GRCh37_chr12:95316310-95316850 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4735 Neighboring gene ReSE screen-validated silencer GRCh37_chr12:95353619-95353879 Neighboring gene NANOG hESC enhancer GRCh37_chr12:95383137-95383648 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:95397104-95397731 Neighboring gene NADH:ubiquinone oxidoreductase subunit A12

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    Genotypes

    General gene information

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    Other Names

    • keratin 19 pseudogene 5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_036685.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AB041269, AC117494
      Related
      ENST00000405395.2

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

      Range
      94834454..94835028
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060936.1 Alternate T2T-CHM13v2.0

      Range
      94815326..94815900
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NG_002383.2: Suppressed sequence

      Description
      NG_002383.2: This RefSeq was permanently suppressed because it is now thought that this gene is a transcribed pseudogene.
    Nucleotide Protein
    Heading Accession and Version

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