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    Prr33 proline rich 33 [ Mus musculus (house mouse) ]

    Gene ID: 677289, updated on 9-Aug-2024

    Summary

    Official Symbol
    Prr33provided by MGI
    Official Full Name
    proline rich 33provided by MGI
    Primary source
    MGI:MGI:3642289
    See related
    Ensembl:ENSMUSG00000043795 AllianceGenome:MGI:3642289
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm14492
    Summary
    Acts upstream of or within response to wounding. Orthologous to human PRR33 (proline rich 33). [provided by Alliance of Genome Resources, Apr 2022]
    Expression
    Biased expression in mammary gland adult (RPKM 24.3), subcutaneous fat pad adult (RPKM 19.1) and 12 other tissues See more
    Orthologs
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    Genomic context

    See Prr33 in Genome Data Viewer
    Location:
    7 F5; 7 87.94 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (142044808..142060508, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (142491080..142506771, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_20508 Neighboring gene synaptotagmin VIII Neighboring gene troponin I, skeletal, fast 2 Neighboring gene STARR-positive B cell enhancer ABC_E10483 Neighboring gene lymphocyte specific 1 Neighboring gene troponin T3, skeletal, fast Neighboring gene CapStarr-seq enhancer MGSCv37_chr7:149724284-149724471 Neighboring gene mitochondrial ribosomal protein L23 Neighboring gene H19/Igf2 enhancer region Neighboring gene non-coding transcript 1

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to wounding IEP
    Inferred from Expression Pattern
    more info
    PubMed 
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001395386.1NP_001382315.1  proline-rich protein 33

      Status: VALIDATED

      Source sequence(s)
      AL603651
      UniProtKB/TrEMBL
      A0A571BD03
      Related
      ENSMUSP00000158581.2, ENSMUST00000238347.2

    RNA

    1. NR_033261.1 RNA Sequence

      Status: PROVISIONAL

      Source sequence(s)
      AK082720, AL603651
      Related
      ENSMUST00000054910.9

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      142044808..142060508 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)